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berkeley_reactor_200306_biofilm_scaffold_127933_42

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(46278..48242)

Top 3 Functional Annotations

Value Algorithm Source
Squalene/oxidosqualene cyclase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B376_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 641.0
  • Bit_score: 944
  • Evalue 5.10e-272
squalene/oxidosqualene cyclase similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 641.0
  • Bit_score: 944
  • Evalue 1.40e-272
Squalene/oxidosqualene cyclase {ECO:0000313|EMBL:AGK56662.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 641.0
  • Bit_score: 944
  • Evalue 7.20e-272

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1965
ATGGTTTCCGAGGTTGAGACGACAGCGCGGCCGGCCCAGCCGGCGCTCGACCGGGCCATCGGCGCCGGCAGCGAGGCCGTGCTGTCGCGTCAGCAGGCGGACGGCCACTGGGTGTTCGAGCTGGAGGCGGACGCGACCATTCCGGCCGAATACATCCTGCTGCGCCACTATCGCCACGAGCCCGACGACCTCAAGCTCGAGGCTGGGATCGCCGCGTATCTGCGCCGCATCCAGGGCACCCATGGCGGCTGGCCGCTGTTCGAGGGCGGGGCGCTCGACGTCAGCGCCAGCGTCAAGGCCTATTTCGCCCTGAAGATGATCGGCGACGGCCCCGACCTGCCGCATATGCGGCGGGCGCGCGAGGCGATCCTCGCCCATGGCGGGGCGGCGCGCAGCAATGTCTTCACCCGCATCCTGCTGGCGCTCTACGAGGCCGTGCCCTGGCGCGCCGTGCCGGTGATGCCGGTGGAGATCATGCTGCTGCCGCGCTGGTTCCCGTTCCACCTCAGCAAGATCTCCTACTGGGCCCGCACGGTGATCGTGCCGCTGCTGATCCTGCAGGCGCTGAAGCCCAAGGCGAAGAACCCGCGCGGCGTCGGCGTCGCCGAGCTCTTCACCGTGCCGCCGGCCGAGGTGCGGCACTGGCCCAAGGGCCCGCACCAGAAGGCGCCCTACGCCCAGATCTTCGGCGGCATCGACCGGGTGCTGCGCGTGGTCGAGCCGCTCTTTCCCGCCGGCTCGCGCAAGCGGGCGATGGCCAAGGCCGAGGCCTTCGTGCTGGAGCGGCTGAACGGCGAGGACGGGCTCGGCGCCATCTATCCCGCCATGGCCAATGCGGTCATGGCCTTCGATGCGCTCGGCTACCCCGCCGGCCATCCGGCCCTGACCATCGCCCGGCACTCGATCGAGAAGCTCCTGGTGGTCAAGGAGGCGGAGACCTATTGCCAGCCCTGCGTCTCGCCGGTCTGGGACACGGCGCTGGTCTGCCACACCCTGCTGGAATCGAGCGGCGAGGAGGCCGTCCGCCAGGCCGAGCGCGGCCTCGCCTGGCTGCAGCCGCGCCAGGTGCTTGACGTCAAGGGCGACTGGGCCGAGATCCGGCCCGACGTCCGGCCCGGCGGCTGGGCCTTCCAATACGCCAATGCCCATTATCCCGACCTCGACGACACCGCCGTGGTGGTCATGGCCATGGACCGGGCCCAGACCGCCGCCGGCCATCGCAACTATGCCGAGGCGATCGCGCGCGGTCGCGAATGGGTCGAGGGGCTGCAGAGCCGCAACGGCGGCTGGGGCGCCTTCGACGCCGACAACGACTACGAGTACCTCAACCACATCCCGTTCTCGGACCACGGCGCCCTGCTCGACCCGCCGACCGCCGACGTGACCGGGCGATGCCTCTCGATGCTCGGACAGCTCGGCGAGACCGCCGCCAGCAGCCGGTCGGTCGCCCGCGGGCTCGACTATCTCCGGAACACCCAGGAGAAGGACGGCAGCTGGTACGGGCGCTGGGGCGTCAACTACGTCTACGGCACCTGGTCGGTGCTGTGCGGCCTCAACGCCGTCGGCGTCGATCCGGCCGCGCCGGAGGTGCGCCGCGCGGTCGATTGGCTGGTCTCGATCCAGAACGCGGACGGGGGCTGGGGCGAGGACTGCGCCAGCTACAGGCTCGACTATGCCGGCTATGAGAAGGCCGCCAGCGCCGCCTCGCAGACCGCCTGGGCCGTGCTCGGCCTGATGGCGGCGGGCGAGACGCACCATCCCGCCGTTGCCCGCGGCGTCGCCTGGCTGGTCGAGCGGCAGGGGCAGGACGGGCTGTGGCCGGAGGAGACCTATACCGGCACCGGCTTCCCGCGCGTGTTCTACCTGCGCTACCACGGCTACGCCAAGTTCTTCCCGCTCTGGGCGGTGTCGCGCTATCGCAACCTGATGCAGGGCAACGGCGCCGCAGTGCTGCACGGCATGTGA
PROTEIN sequence
Length: 655
MVSEVETTARPAQPALDRAIGAGSEAVLSRQQADGHWVFELEADATIPAEYILLRHYRHEPDDLKLEAGIAAYLRRIQGTHGGWPLFEGGALDVSASVKAYFALKMIGDGPDLPHMRRAREAILAHGGAARSNVFTRILLALYEAVPWRAVPVMPVEIMLLPRWFPFHLSKISYWARTVIVPLLILQALKPKAKNPRGVGVAELFTVPPAEVRHWPKGPHQKAPYAQIFGGIDRVLRVVEPLFPAGSRKRAMAKAEAFVLERLNGEDGLGAIYPAMANAVMAFDALGYPAGHPALTIARHSIEKLLVVKEAETYCQPCVSPVWDTALVCHTLLESSGEEAVRQAERGLAWLQPRQVLDVKGDWAEIRPDVRPGGWAFQYANAHYPDLDDTAVVVMAMDRAQTAAGHRNYAEAIARGREWVEGLQSRNGGWGAFDADNDYEYLNHIPFSDHGALLDPPTADVTGRCLSMLGQLGETAASSRSVARGLDYLRNTQEKDGSWYGRWGVNYVYGTWSVLCGLNAVGVDPAAPEVRRAVDWLVSIQNADGGWGEDCASYRLDYAGYEKAASAASQTAWAVLGLMAAGETHHPAVARGVAWLVERQGQDGLWPEETYTGTGFPRVFYLRYHGYAKFFPLWAVSRYRNLMQGNGAAVLHGM*