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berkeley_reactor_200306_biofilm_scaffold_154490_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10832..12424)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D9E6F similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 523.0
  • Bit_score: 812
  • Evalue 1.40e-232
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 523.0
  • Bit_score: 796
  • Evalue 3.00e-228
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADH88127.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 523.0
  • Bit_score: 796
  • Evalue 1.50e-227

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGTCGAAGACCCTGAAAACCGGCCTTCTGGCGGCGACGGTCGCCGTGCTGCTGGGGACGACGGCCGCCGGCGCCAAGACGCTGGTCTACTGCTCCGAAGGCAGCCCTGAGAATTTCACGCCGGCGCTGAACACCACGGGCACGTCCCTGGATGCGGCGCGCCCGGTGTTCAACCAGCTGGTCGAGTTCGAGCCCGGCACCACCAACGTCATTCCCGGCCTGGCCGAAAAATGGGAAATCTCGAAGGACGGGCTGGAGATCACCTTCCATCTGCGCAAGGGCGTGAAGTTCCATGCCTACAAGGGCTTCAAGCCGACGCGCGACTTCGATGCCGACGACGTGCTGTTCTCCTTCAACCGCCAGTGGAAGGACGATCATCCCTACCACAAGGTCTCGGGCGGCGCCTTCGATTACTTCAACGACATGGACATGCCCAAGCTGTTGAAGTCGATCGACAAGGTCGACGACTATACGGTGAAGGTGACGCTGACCGAGGCCAACGCCCCGATCCTGGCGAATTTCGCCATGGACTTCGCCACCATCGAGTCGGCCGAATATGCCGACTATCTCCTGAAGGCGGGCACGCCGGAGAAGTTCGACCAGGAGCCGGTCGGCACCGGGCCGTTCCAGTTCACGTCCTATCAGAAAGACGCGGTGATCCGCTACAAGGCCTTCCCGGAGTACTGGGGCGGCAAGGCCAAGCTCGACGGCCTGGTCTATGCCATCACGCCGGACGCGACCGCGCGCTTCGCCAAGCTGCGGAAGGGCGAATGCCAGGTGATGGGCTATCCCAACCCGGCCGACCTCGCGGCGATGAAGGAGGACAAGAAGATCAACCTCCTGTCCCAGGCCGGCCTCAACATCGCCTACTGGGCCTTCAACGTGGAGAAGCCGCCCTTCGACAAGAAGGAGGTACGCCAGGCGCTCTCCATGGCGATCGACAAGGACGCCATCATCAAGGACGTCTACCAGGGCGCCGGCCAGGCGGCCAAGAACCTGATCCCGCCGACGATCTGGGGCTATAACGACAAGGTCGTGGACTACAAGTACGACCCGGCCGCGGCCAAGGCGCTGCTGGCCAAGGCCGGCATCACCTCGCTCGACATCGACCTGTGGTACATGCCGGTGCAACGCCCCTACAACCCGGCCGCCAAGCGCATCGCCGAGATGATGCAGGCCGACCTCGCCAAGGTCGGCGTCAACGCCAAGCTCGTCACGTATGAGTGGGGCGAGTATCGCAAGCGCCTGCAGGCGGGCGAGCACATGACCGGCCAGCTCGGCTGGACCGGCGACAACGGCGATCCCGACAACTTCTTCTTCCTGCTCGGCTGCGCCGCGGCGCGCCCGGGCGGCCAGAACCTGTCCAAGTGGTGCGACAAGGACTTCGATGAGCGCCTGACCAAGGCGCGCCAGACCTTCGACAAGGCCGAGCGCACCAAGCTCTACGAGGAGATGCAGCAGATCGCCCATGACGAGGAGCCGCAGATGACCATCGCGCACTCCGTCGTCTACGAGCCGATCAGCGCCAATGTCGAGGGCTACAAGGTCTCCCCGCTCGGCCGGCACGAGTTCTACGGCGTCACGCTGAAGTAA
PROTEIN sequence
Length: 531
MSKTLKTGLLAATVAVLLGTTAAGAKTLVYCSEGSPENFTPALNTTGTSLDAARPVFNQLVEFEPGTTNVIPGLAEKWEISKDGLEITFHLRKGVKFHAYKGFKPTRDFDADDVLFSFNRQWKDDHPYHKVSGGAFDYFNDMDMPKLLKSIDKVDDYTVKVTLTEANAPILANFAMDFATIESAEYADYLLKAGTPEKFDQEPVGTGPFQFTSYQKDAVIRYKAFPEYWGGKAKLDGLVYAITPDATARFAKLRKGECQVMGYPNPADLAAMKEDKKINLLSQAGLNIAYWAFNVEKPPFDKKEVRQALSMAIDKDAIIKDVYQGAGQAAKNLIPPTIWGYNDKVVDYKYDPAAAKALLAKAGITSLDIDLWYMPVQRPYNPAAKRIAEMMQADLAKVGVNAKLVTYEWGEYRKRLQAGEHMTGQLGWTGDNGDPDNFFFLLGCAAARPGGQNLSKWCDKDFDERLTKARQTFDKAERTKLYEEMQQIAHDEEPQMTIAHSVVYEPISANVEGYKVSPLGRHEFYGVTLK*