name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_117554_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(41..238)
|
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000380F78F
Uncharacterized protein {ECO:0000313|EMBL:ERK73452.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GTPase ObgE
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
300..1454
|
arsenic transporter n=1 Tax=Microbacteriaceae RepID=UPI0003743E4E
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
arsB; arsenical pump membrane protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(1465..3435)
|
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036E1464
YhgE/Pip N-terminal domain protein {ECO:0000313|EMBL:EIC08459.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3432..6380)
|
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003657737
drug exporters of the RND superfamily
Predicted drug exporters of the RND superfamily {ECO:0000313|EMBL:BAJ75304.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6516..7178
|
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036681A5
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK69208.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_6
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7230..8111
|
Secreted hydrolase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P7K6_LEIXC
secreted hydrolase
Uncharacterized protein {ECO:0000313|EMBL:AGW41816.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8023..8940)
|
AP endonuclease, family 2 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9W7_LEIAQ
AP endonuclease, family 2 {ECO:0000313|EMBL:ERK71492.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9131..10609
|
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
trehalose-phosphate synthase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000372B5BB
otsA; trehalose-6-phosphate synthase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10623..11435
|
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Trehalose-phosphatase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8D6_LEIAQ
trehalose-phosphatase protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11522..13216
|
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
dihydroxy-acid dehydratase n=1 Tax=Microbacteriaceae RepID=UPI00037FB368
dihydroxy-acid dehydratase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13272..15077
|
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Acetolactate synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T204_LEIAQ
acetolactate synthase 1 catalytic subunit
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15080..15589
|
acetolactate synthase n=1 Tax=Microbacteriaceae RepID=UPI00037B6948
acetolactate synthase 3 regulatory subunit
Uncharacterized protein {ECO:0000313|EMBL:AGW41811.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_13
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15664..16692
|
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
ketol-acid reductoisomerase n=1 Tax=Microbacteriaceae RepID=UPI000368405D
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_14
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(16775..16963)
|
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QKQ3_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB13404.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_15
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17516..17788
|
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P8K5_LEIXC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41809.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17918..19510
|
Phosphoglycerate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R6G7_LEIAQ
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ERK70835.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
serA; D-3-phosphoglycerate dehydrogenase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19620..19985
|
DGPF domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPR8_LEIAQ
DGPF domain protein {ECO:0000313|EMBL:ERK70836.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_18
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20021..21268
|
RNA polymerase subunit sigma-24 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34195
Uncharacterized protein {ECO:0000313|EMBL:KHK97564.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative ECF subfamily RNA polymerase sigma-24 factor
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(21273..21857)
|
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000362D3FA
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK70932.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator, TetR family
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21925..23466
|
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037F53D2
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:ERK70933.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator superfamily protein
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23643..24698
|
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQT0_LEIAQ
Putative 3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ERK70934.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_22
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24722..25852
|
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
branched-chain amino acid aminotransferase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003816FBA
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AAT89149.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25950..27044)
|
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RL48_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69596.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
selenocysteine lyase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_24
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27103..28068
|
LysR family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B56600
LysR family transcriptional regulator {ECO:0000313|EMBL:KFF59872.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_25
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28089..28967
|
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036BDA90
oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AGW41865.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28964..29731
|
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Leifsonia sp. 109 RepID=UPI0003647D75
FAH family protein {ECO:0000313|EMBL:ERK70235.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
5-oxo-1,2,5-tricarboxylic-3-penten acid decarboxilase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
29744..31273
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glutamate--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNS7_LEIAQ
glutamyl-tRNA synthetase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
31282..32220
|
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000362B410
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERK70233.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
pyridine nucleotide-disulfide oxidoreductase
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(32234..32680)
|
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RK43_LEIAQ
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK69271.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MarR family transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_117554_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
32782..33861
|
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R1W2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69270.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
|