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berkeley_reactor_200306_biofilm_scaffold_32105

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_32105_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..2304)
DNA (2304bp) protein (768aa)
FG-GAP repeat protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBT0_SINAD
FG-GAP repeat protein {ECO:0000313|EMBL:AGA26293.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
FG-GAP repeat-containing protein
berkeley_reactor_200306_biofilm_scaffold_32105_2
unknown

Not on your lists

2517..3431
DNA (915bp) protein (305aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_32105_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3548..4522)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA90_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26294.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4522..5460)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBR5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26295.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6074..6616
DNA (543bp) protein (181aa)
Flp pilus assembly protein, protease CpaA n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCA0_SINAD
Flp pilus assembly protein, protease CpaA
Flp pilus assembly protein, protease CpaA {ECO:0000313|EMBL:AGA26296.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6672..7676
DNA (1005bp) protein (335aa)
Flp pilus assembly protein CpaB n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAL2_SINAD
Flp pilus assembly protein CpaB
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:AGA26297.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_7
unknown

Not on your lists

comp(7747..8283)
DNA (537bp) protein (179aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_32105_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8354..8905
DNA (552bp) protein (184aa)
Flp pilus assembly protein, ATPase CpaE n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBT4_SINAD
Flp pilus assembly protein, ATPase CpaE
Flp pilus assembly protein, ATPase CpaE {ECO:0000313|EMBL:AGA26298.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8986..10452
DNA (1467bp) protein (489aa)
Flp pilus assembly protein, ATPase CpaF n=2 Tax=Singulisphaera acidiphila RepID=L0DA96_SINAD
Flp pilus assembly protein, ATPase CpaF
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:AGA26299.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_10
unknown

Not on your lists

10782..11222
DNA (441bp) protein (147aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_32105_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11687..12658
DNA (972bp) protein (324aa)
Flp pilus assembly protein TadB n=2 Tax=Singulisphaera acidiphila RepID=L0DBS0_SINAD
Flp pilus assembly protein TadB
Flp pilus assembly protein TadB {ECO:0000313|EMBL:AGA26300.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12663..13610
DNA (948bp) protein (316aa)
Flp pilus assembly protein TadC n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCA6_SINAD
Flp pilus assembly protein TadC
Flp pilus assembly protein TadC {ECO:0000313|EMBL:AGA26301.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13644..13991
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DAL8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26302.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_14
unknown

Not on your lists

comp(13877..14665)
DNA (789bp) protein (263aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_32105_trna_1
unknown

Not on your lists

14117..14199
DNA (83bp)
transferRNA Leu
berkeley_reactor_200306_biofilm_scaffold_32105_15
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14806..15174
DNA (369bp) protein (123aa)
UPF0314 protein RLDS_13860 n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HPA2_9SPHN
UPF0314 protein RLDS_13860 {ECO:0000256|HAMAP-Rule:MF_01514}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_32105_16
unknown

Not on your lists

comp(15196..15690)
DNA (495bp) protein (165aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_32105_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16155..17552
DNA (1398bp) protein (466aa)
3'' terminal RNA ribose 2''-O-methyltransferase Hen1 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7P7_SINAD
3'' terminal RNA ribose 2''-O-methyltransferase Hen1
3'' terminal RNA ribose 2''-O-methyltransferase Hen1 {ECO:0000313|EMBL:AGA24676.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17779..20385
DNA (2607bp) protein (869aa)
Polynucleotide kinase-phosphatase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D721_SINAD
Polynucleotide kinase-phosphatase {ECO:0000313|EMBL:AGA24675.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
polynucleotide kinase-phosphatase
berkeley_reactor_200306_biofilm_scaffold_32105_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20515..21879
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0003668A05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28177.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_20
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(21890..22603)
DNA (714bp) protein (238aa)
sulfurase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3882
MOSC domain containing protein
MOSC domain containing protein {ECO:0000313|EMBL:AFZ38148.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
berkeley_reactor_200306_biofilm_scaffold_32105_21
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

23009..23497
DNA (489bp) protein (163aa)
Transcriptional regulator, MarR family n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPJ2_MARHT
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEB12493.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
berkeley_reactor_200306_biofilm_scaffold_32105_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23621..24109
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL91_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30164.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_biofilm_scaffold_32105_23
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

24103..25215
DNA (1113bp) protein (371aa)
Aldo/keto reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKU7_9BACT
Aldo/keto reductase {ECO:0000313|EMBL:EEF59590.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative aldo/keto reductase
Displaying 24 items

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