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berkeley_reactor_200306_planktonic_scaffold_78803

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_78803_1
unknown

Not on your lists

comp(73..300)
DNA (228bp) protein (76aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_78803_2
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..830)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255861B
Uncharacterized protein {ECO:0000313|EMBL:KJZ18481.1}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella sp. S4079.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_78803_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(788..1546)
DNA (759bp) protein (253aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR25_SINAD
TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AGA31412.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1543..2268)
DNA (726bp) protein (242aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQX4_SINAD
TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AGA31413.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_5
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2261..3376)
DNA (1116bp) protein (372aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPX0_SINAD
L-alanine-DL-glutamate epimerase-like protein
Tax=RBG_16_Planctomycetes_64_12_curated
berkeley_reactor_200306_planktonic_scaffold_78803_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3377..4669)
DNA (1293bp) protein (431aa)
Transcriptional regulator/sugar kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQZ0_SINAD
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:AGA31415.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5093..6151
DNA (1059bp) protein (353aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DST1_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA31416.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6215..6706
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR29_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31417.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6824..8449)
DNA (1626bp) protein (542aa)
Hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DED1_SINAD
hydro-lyase family protein
Hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily {ECO:0000313|EMBL:AGA27612.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9290..10069
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEQ0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27737.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_11
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10105..10455)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003178BF9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU37143.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
berkeley_reactor_200306_planktonic_scaffold_78803_12
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10824..12095
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W323_DESAS
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
berkeley_reactor_200306_planktonic_scaffold_78803_13
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12288..13067
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035C11EC
isoprenylcysteine carboxyl methyltransferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
berkeley_reactor_200306_planktonic_scaffold_78803_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13235..13801
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8C6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25088.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14004..14825)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGP0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27973.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_16

Not on your lists

15151..15690
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B73BA8
Uncharacterized protein {ECO:0000313|EMBL:KKL47616.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA polymerase ECF subfamily sigma factor
berkeley_reactor_200306_planktonic_scaffold_78803_17
unknown

Not on your lists

15717..17255
DNA (1539bp) protein (513aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_78803_18
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17759..19096)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B77928
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV81780.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
berkeley_reactor_200306_planktonic_scaffold_78803_19

Not on your lists

comp(19261..19716)
DNA (456bp) protein (152aa)
nuclear protein SET; K07117 id=5050409 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO47383.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Putative Histone-lysine N-methyltransferase
berkeley_reactor_200306_planktonic_scaffold_78803_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20089..20667
DNA (579bp) protein (193aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D709_SINAD
Cu/Zn superoxide dismutase
berkeley_reactor_200306_planktonic_scaffold_78803_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20889..22268
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Argininosuccinate lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D715_SINAD
argininosuccinate lyase
berkeley_reactor_200306_planktonic_scaffold_78803_22
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

22340..22681
DNA (342bp) protein (114aa)
Diaminopimelate decarboxylase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DJI8_DESVM
diaminopimelate decarboxylase
Tax=RBG_13_Actinobacteria_55_18_curated
berkeley_reactor_200306_planktonic_scaffold_78803_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22740..25058
DNA (2319bp) protein (773aa)
HEAT repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5B9_SINAD
HEAT repeat-containing protein
HEAT repeat-containing protein {ECO:0000313|EMBL:AGA24629.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25262..26386
DNA (1125bp) protein (375aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=2 Tax=Singulisphaera acidiphila RepID=L0D6X6_SINAD
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGA24630.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26391..27272
DNA (882bp) protein (294aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
DNA modification methylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7K8_SINAD
DNA modification methylase
berkeley_reactor_200306_planktonic_scaffold_78803_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27974..29101
DNA (1128bp) protein (376aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKL0_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA29904.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29222..29689
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM73_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29905.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_78803_28
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29813..30421
DNA (609bp) protein (203aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJF4_9BACT
Ser/Thr protein phosphatase family protein
Tax=RBG_16_Planctomycetes_64_10_curated
berkeley_reactor_200306_planktonic_scaffold_78803_29
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30450..31640)
DNA (1191bp) protein (397aa)
Bicupin, oxalate decarboxylase/oxidase n=1 Tax=Schlesneria paludicola RepID=UPI00029A874D
Oxalate decarboxylase {ECO:0000313|EMBL:KGT81694.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
oxalate decarboxylase family bicupin
berkeley_reactor_200306_planktonic_scaffold_78803_30
Aphanomyces invadans, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

31928..32323
DNA (396bp) protein (132aa)
PREDICTED: uncharacterized protein LOC100875109 n=1 Tax=Megachile rotundata RepID=UPI000258DAED
Uncharacterized protein {ECO:0000313|EMBL:ETV97543.1}; TaxID=157072 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces invadans.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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