ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_11935

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_11935_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

669..1085
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000362DF97
ester cyclase
Putative ester cyclase {ECO:0000313|EMBL:AGA26443.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1307..2338)
DNA (1032bp) protein (344aa)
6-phosphofructokinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGS1_SINAD
phosphofructokinase
Phosphofructokinase {ECO:0000313|EMBL:AGA28008.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2679..4046)
DNA (1368bp) protein (456aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Singulisphaera acidiphila RepID=L0DFH1_SINAD
acetyl-CoA carboxylase, biotin carboxylase subunit
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:AGA28007.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4186..4680)
DNA (495bp) protein (165aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH63_SINAD
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:AGA28006.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4715..5809)
DNA (1095bp) protein (365aa)
Xaa-Pro aminopeptidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGM9_SINAD
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AGA28005.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6012..6668
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF46_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28004.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6775..7779)
DNA (1005bp) protein (335aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGR6_SINAD
methanol dehydrogenase
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:AGA28003.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8089..8376)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFG8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28002.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8475..9911
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH58_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28001.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10111..10758
DNA (648bp) protein (216aa)
Putative integral membrane protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGM4_SINAD
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:AGA28000.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11027..12100
DNA (1074bp) protein (358aa)
Exopolyphosphatase-like enzyme n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF42_SINAD
exopolyphosphatase-like protein
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:AGA27999.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_12
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12437..14599
DNA (2163bp) protein (721aa)
Secreted protein containing DUF1549 n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RUI1_9PLAN
Secreted protein containing DUF1549 {ECO:0000313|EMBL:EMI19052.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_11935_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14673..16073
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE84_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27138.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_14
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16330..16620
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Arthrospira platensis (strain NIES-39 / IAM M-135) RepID=D4ZY67_ARTPN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI88295.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
berkeley_reactor_200306_planktonic_scaffold_11935_15
unknown

Not on your lists

16613..17020
DNA (408bp) protein (136aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_11935_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17466..18374
DNA (909bp) protein (303aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA49_SINAD
4-hydroxybenzoate polyprenyltransferase
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AGA26122.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18608..19705
DNA (1098bp) protein (366aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBT1_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA26121.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20044..20880)
DNA (837bp) protein (279aa)
Putative metal-dependent hydrolase with TIM-barrel fold n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9P9_SINAD
metal-dependent hydrolase
Putative metal-dependent hydrolase with TIM-barrel fold {ECO:0000313|EMBL:AGA26119.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_19
unknown

Not on your lists

comp(20953..21516)
DNA (564bp) protein (188aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_11935_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21750..22028)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DBS6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26116.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22242..23558
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DB75_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26115.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23748..24884
DNA (1137bp) protein (379aa)
Glycosyltransferase n=2 Tax=Singulisphaera acidiphila RepID=L0D9P3_SINAD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGA26114.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_23
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24974..25852
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R521_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62778.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
berkeley_reactor_200306_planktonic_scaffold_11935_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25926..27230)
DNA (1305bp) protein (435aa)
Na+/H+ dicarboxylate symporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA39_SINAD
Na+/H+ dicarboxylate symporter
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:AGA26112.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27676..28974
DNA (1299bp) protein (433aa)
Type II secretory pathway, component PulF n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAU9_SINAD
type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:AGA25958.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29000..30391
DNA (1392bp) protein (464aa)
Neutral/alkaline non-lysosomal ceramidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D994_SINAD
Neutral/alkaline non-lysosomal ceramidase
Neutral/alkaline non-lysosomal ceramidase {ECO:0000313|EMBL:AGA25959.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(30480..31811)
DNA (1332bp) protein (444aa)
Arabinose efflux permease family protein n=2 Tax=Singulisphaera acidiphila RepID=L0DAT5_SINAD
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGA25960.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_11935_28
unknown

Not on your lists

comp(31883..32032)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 28 items

View Taxonomy