ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_84154

Search features with annotation key words

Displaying items 91-108 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_84154_90
unknown

Not on your lists

105085..105327
DNA (243bp) protein (81aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_91
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(105324..106046)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DID2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28573.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_92
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(106043..109162)
DNA (3120bp) protein (1040aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH36_SINAD
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AGA28572.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_93
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(109159..109413)
DNA (255bp) protein (85aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIT8_SINAD
sugar metabolism transcriptional regulator
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:AGA28571.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_94
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(109614..111995)
DNA (2382bp) protein (794aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC62_SINAD
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AGA26827.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
copper/silver-translocating P-type ATPase
berkeley_reactor_200306_planktonic_scaffold_84154_95
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111998..112402)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035C67BD
MerR family transcriptional regulator
Tax=GWC2_Deltaproteobacteria_65_14_curated
berkeley_reactor_200306_planktonic_scaffold_84154_96
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112489..113121)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YVA1_9RHIZ
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
berkeley_reactor_200306_planktonic_scaffold_84154_97
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113138..113839)
DNA (702bp) protein (234aa)
Copper resistance B family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRL5_MICAA
copper resistance B family protein
Copper resistance B family protein {ECO:0000313|EMBL:AEP09577.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
berkeley_reactor_200306_planktonic_scaffold_84154_98
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113829..115457)
DNA (1629bp) protein (543aa)
Copper resistance protein A n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRL4_MICAA
copA; copper resistance protein A
Copper resistance protein A {ECO:0000313|EMBL:AEP09576.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
berkeley_reactor_200306_planktonic_scaffold_84154_99
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(115463..115759)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VK86_9PROT
Putative copper-sensing transcriptional repressor csoR {ECO:0000313|EMBL:CDR35303.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_100
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(116091..116741)
DNA (651bp) protein (217aa)
Lipoprotein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HRJ9_9ACTO
Lipoprotein {ECO:0000313|EMBL:EDY55454.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_101
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(116809..117510)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDU1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26831.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_102
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(117712..118176)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEH4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27774.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_103
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(118270..119412)
DNA (1143bp) protein (381aa)
BNR repeat-containing glycosyl hydrolase n=2 Tax=Rhodopirellula baltica RepID=F2AZJ6_RHOBT
glycosyl hydrolase, BNR repeat-containing protein
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:AIE83777.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
berkeley_reactor_200306_planktonic_scaffold_84154_104
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(119425..123444)
DNA (4020bp) protein (1340aa)
Putative silver efflux pump n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC68_SINAD
silver efflux pump
Putative silver efflux pump {ECO:0000313|EMBL:AGA26832.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_105
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(123462..125183)
DNA (1722bp) protein (574aa)
Membrane-fusion protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDC3_SINAD
membrane-fusion protein
Membrane-fusion protein {ECO:0000313|EMBL:AGA26833.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_106
unknown

Not on your lists

comp(125356..125835)
DNA (480bp) protein (160aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_107
unknown

Not on your lists

126030..126110
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying items 91-108 of 108 in total

View Taxonomy