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berkeley_reactor_200306_planktonic_scaffold_84154

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_84154_60
unknown

Not on your lists

68120..68377
DNA (258bp) protein (86aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_61
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(68612..69961)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FUH1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN54011.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
HEAT-repeat-containing PBS lyase
berkeley_reactor_200306_planktonic_scaffold_84154_62
unknown

Not on your lists

comp(70262..70471)
DNA (210bp) protein (70aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_63
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(71078..74188)
DNA (3111bp) protein (1037aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
berkeley_reactor_200306_planktonic_scaffold_84154_64
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74391..74711)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NF06_ROSCS
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
berkeley_reactor_200306_planktonic_scaffold_84154_65
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74712..74951)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P9Z3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX08376.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
berkeley_reactor_200306_planktonic_scaffold_84154_66
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74954..75310)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4P1Z8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ88022.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_67
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75754..76647
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AHV3_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE55968.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_68
unknown

Not on your lists

comp(76790..77278)
DNA (489bp) protein (163aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_69
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(77275..79956)
DNA (2682bp) protein (894aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D3364D
DNA helicase TraI/TrwC relaxase
DNA helicase TraI/TrwC relaxase {ECO:0000313|EMBL:AGA31712.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_70
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

80410..80619
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP19_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81493.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_71
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

80677..81432
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000380CA6E
Uncharacterized protein {ECO:0000313|EMBL:EAQ79354.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_72
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81459..81905
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI000364A5ED
Uncharacterized protein {ECO:0000313|EMBL:KGJ18796.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_84154_73
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

81902..82066
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP26_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81500.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
berkeley_reactor_200306_planktonic_scaffold_84154_74
unknown

Not on your lists

82394..82612
DNA (219bp) protein (73aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_75
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

82943..83260
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP33_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81507.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
berkeley_reactor_200306_planktonic_scaffold_84154_76
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

83392..88581
DNA (5190bp) protein (1730aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F8B0C9
Helicase, C-terminal {ECO:0000313|EMBL:EAQ81510.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
helicase, C-terminal, partial
berkeley_reactor_200306_planktonic_scaffold_84154_77
unknown

Not on your lists

88584..88895
DNA (312bp) protein (104aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_78
unknown

Not on your lists

89270..89650
DNA (381bp) protein (127aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_79
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

89800..91278
DNA (1479bp) protein (493aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC48_SINAD
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA26430.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_80
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

91304..94540
DNA (3237bp) protein (1079aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCR8_SINAD
heavy metal efflux pump
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGA26431.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_81
unknown

Not on your lists

94630..94845
DNA (216bp) protein (72aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_82
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

94995..96626
DNA (1632bp) protein (544aa)
Outer membrane protein n=2 Tax=Singulisphaera acidiphila RepID=L0DKS2_SINAD
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGA29420.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_84154_83
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97040..98302
DNA (1263bp) protein (421aa)
Putative sodium/calcium exchanger type membrane protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASJ6_METEA
sodium/calcium exchanger type membrane protein
Putative sodium/calcium exchanger type membrane protein {ECO:0000313|EMBL:ACS40437.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
berkeley_reactor_200306_planktonic_scaffold_84154_84
unknown

Not on your lists

98399..98512
DNA (114bp) protein (38aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_85
unknown

Not on your lists

98680..99003
DNA (324bp) protein (108aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_84154_86
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99101..100492
DNA (1392bp) protein (464aa)
Outer membrane efflux family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KS16_MICAA
outer membrane efflux family protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
berkeley_reactor_200306_planktonic_scaffold_84154_87
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100584..101543
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DI49_9PROT
smmK; Co/Zn/Cd efflux system membrane fusion protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
berkeley_reactor_200306_planktonic_scaffold_84154_88
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101549..104794
DNA (3246bp) protein (1082aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E3930
czcA; cobalt-zinc-cadmium resistance protein czcA
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
berkeley_reactor_200306_planktonic_scaffold_84154_89
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104791..105069
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KIL99089.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Displaying items 61-90 of 108 in total

View Taxonomy