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This organism can only be binned in the context of its binning project SCNPILOT_SOLID_1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

berkeley_reactor_200306_planktonic_scaffold_84154_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 80677..81432

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000380CA6E similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 242.0
  • Bit_score: 396
  • Evalue 2.00e-107
Uncharacterized protein {ECO:0000313|EMBL:EAQ79354.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 140.0
  • Bit_score: 143
  • Evalue 3.30e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 213.0
  • Bit_score: 93
  • Evalue 7.80e-17

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Taxonomy

Blastopirellula marina → Blastopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGACCTCCCACCACGCGCCGATCAATCCCTTCTACGCCGCCCGGCTCAACCAGGCCGGCCCCGAACGGCAGCCCGAACCCGGCAAGCCGATCTATGCCCGCCTGCCCCAGGCACCGATCACGGCAAGCCCGGTTCCGCACCTGACCAGCCTCTATCACTTCCACCGCACGGGCGAGTACGGCGACCGCTCCTATCCTGGTAATTGCGGGGGTCGCCTCATCAAGGACCTGCTCCTCTACTTCCGGCCGGGGCTGGTCTTCGACCCGATGACCGGCAGCGGCACCTGCCGGGACGTCTGCCAGGAGCTGGGCATCCCCTGCATTTCCTGGGACATCCACCAGGGCATCGACGCCTGCGACCCGAAAGGGTTTGGCGACGCCGAGACCTTCGACTTCGTCTGGGCCCATCCTCCCTACTGGCGGCAGAAGCTCTACGCCGACGATCCCCGGGACCTGTCGCGAACGCCGACCCTGGAGGAGTTCCTGCGCCGCTACCGGCAATTCCTCCGCAACTCCGCCCGTTCGCTCAAGCGAGGCGGGAAGCTGGCCATCCTCATGGGCGACTACTCGGATCGCACGAGCGGATTCGTCCCGCTGGTCTACCACACCAAGCGGCTCGCCTTCGAGGCCGGGCTCGTCCAGCACTGCACTGACATCATTCGCTTCAGCCACGGGGCCAGCAGCTCGAAGAAGGTCTACCGGACCAGCTTCATCCCCGGTCTGCACGACGTCTGCATGATCTTCGAACGCCCGTAA
PROTEIN sequence
Length: 252
MTSHHAPINPFYAARLNQAGPERQPEPGKPIYARLPQAPITASPVPHLTSLYHFHRTGEYGDRSYPGNCGGRLIKDLLLYFRPGLVFDPMTGSGTCRDVCQELGIPCISWDIHQGIDACDPKGFGDAETFDFVWAHPPYWRQKLYADDPRDLSRTPTLEEFLRRYRQFLRNSARSLKRGGKLAILMGDYSDRTSGFVPLVYHTKRLAFEAGLVQHCTDIIRFSHGASSSKKVYRTSFIPGLHDVCMIFERP*