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berkeley_reactor_200306_planktonic_scaffold_13269

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_13269_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3..107
DNA (105bp) protein (35aa)
Transposase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHN0_SINAD
transposase family protein
Transposase family protein {ECO:0000313|EMBL:AGA28323.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..848)
DNA (711bp) protein (237aa)
Multi-sensor hybrid histidine kinase (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZJ66_9PROT
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EKM99495.1}; Flags: Fragment;; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
sensory box histidine kinase
berkeley_reactor_200306_planktonic_scaffold_13269_3
unknown

Not on your lists

comp(1174..1551)
DNA (378bp) protein (126aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_13269_4
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1810..2220
DNA (411bp) protein (137aa)
BlaI family transcriptional regulator n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4A0_9PLAN
BlaI family transcriptional regulator {ECO:0000313|EMBL:EDL60333.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_13269_5
bacterium UASB14, Bacteria

Not on your lists

2217..5441
DNA (3225bp) protein (1075aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000379B501
putative WD-40 repeat protein
WD-40 repeat protein {ECO:0000313|EMBL:GAK54714.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
berkeley_reactor_200306_planktonic_scaffold_13269_6
Streptomyces sp. SM8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5584..7458)
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI00035EE0C3
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EKC94860.1}; Flags: Precursor;; TaxID=1195457 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SM8.;"
von Willebrand factor type A domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_13269_7
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(8844..9812)
DNA (969bp) protein (323aa)
Metallophosphoesterase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJI4_9CYAN
hypothetical protein
Metallophosphoesterase {ECO:0000313|EMBL:AGY59081.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
berkeley_reactor_200306_planktonic_scaffold_13269_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10397..12256)
DNA (1860bp) protein (620aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR85_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31487.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12563..14287)
DNA (1725bp) protein (575aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHB8_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28066.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14637..16553)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003603904
glycyl aminopeptidase
Glycyl aminopeptidase. Metallo peptidase. MEROPS family M61 {ECO:0000313|EMBL:ABJ84416.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
berkeley_reactor_200306_planktonic_scaffold_13269_11
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(16858..18813)
DNA (1956bp) protein (652aa)
hypothetical protein, partial n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B7656B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW34396.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
berkeley_reactor_200306_planktonic_scaffold_13269_12
unknown

Not on your lists

19006..19776
DNA (771bp) protein (257aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_13269_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19748..20434
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFG1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27558.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20670..21422
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBM4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26056.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21684..22508
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEQ0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27737.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_16
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22634..23419
DNA (786bp) protein (262aa)
lexA; lexA repressor (EC:3.4.21.88)
probable lexA repressor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38CC
Uncharacterized protein {ECO:0000313|EMBL:KKG83670.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
berkeley_reactor_200306_planktonic_scaffold_13269_17
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23495..23737
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S289_9PLAN
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ05585.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_13269_18
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23790..26123
DNA (2334bp) protein (778aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3513
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
berkeley_reactor_200306_planktonic_scaffold_13269_19
unknown

Not on your lists

comp(26517..27044)
DNA (528bp) protein (176aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_13269_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27603..28829
DNA (1227bp) protein (409aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D749_SINAD
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:AGA24658.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29161..30630)
DNA (1470bp) protein (490aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHZ2_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29004.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

30994..31650
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHZ4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28428.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

32138..34486
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D814_SINAD
Uncharacterized protein {ECO:0000313|EMBL:AGA25549.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_13269_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

34483..35832
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9K5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25550.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

35867..37339
DNA (1473bp) protein (491aa)
Ankyrin repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA78_SINAD
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGA25551.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(37600..38892)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN14_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30769.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

39211..40341
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E4FA71
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGA25498.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_13269_28
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40895..41662)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B3ED5
Uncharacterized protein {ECO:0000313|EMBL:ETW95060.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_13269_29
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(41667..43589)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A7375
Tax=RBG_13_Planctomycetes_63_9_curated
berkeley_reactor_200306_planktonic_scaffold_13269_30
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(43589..46552)
DNA (2964bp) protein (988aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ADA90
batB; BatB
Tax=RBG_13_Planctomycetes_63_9_curated
Displaying items 1-30 of 37 in total

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