ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_250619

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_250619_1

Not on your lists

comp(180..1496)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A7245
Uncharacterized protein {ECO:0000313|EMBL:CBI00675.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_250619_2
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1538..2827)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3I0_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61547.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
berkeley_reactor_200306_planktonic_scaffold_250619_3
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3091..3666)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3H8_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61545.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
berkeley_reactor_200306_planktonic_scaffold_250619_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3858..5000)
DNA (1143bp) protein (381aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEW1_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA27899.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_250619_5
unknown

Not on your lists

6161..6793
DNA (633bp) protein (211aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_250619_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7193..9130
DNA (1938bp) protein (646aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ERZ2_SORC5
alpha-amylase-family protein
berkeley_reactor_200306_planktonic_scaffold_250619_7
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9123..11159
DNA (2037bp) protein (679aa)
Glycogen debranching protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCF2_SORCE
glycogen debranching protein
Tax=GWC2_Nitrospirae_57_9_curated
berkeley_reactor_200306_planktonic_scaffold_250619_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11191..11715)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIX3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29212.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 8 items

View Taxonomy