ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_18693_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 20120..21277

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABBF1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 389.0
  • Bit_score: 467
  • Evalue 8.30e-129
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 372.0
  • Bit_score: 440
  • Evalue 4.00e-121
ABC-2 type transporter {ECO:0000313|EMBL:ACI56269.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 372.0
  • Bit_score: 440
  • Evalue 2.00e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGACCGAGCCCTCCCGAGGGGGCGCCTCGGCCCTGCGAAGGGTCGCCGGCCTGGTGCGCAAGGAGACGTTCCAGATCGTCCGGGACCCCAGCAGCTACCTGATCGCCGGGGCCCTGCCGATGCTGCTCCTGTTCCTCTTCGCCTTCGGCGTCTCGCTCGACCTGGGGAGGGTCCCGATCGGCCTGGTCGTCGAGCGGCCGACCCCGGAGGCCGACAGCCTGGTGGCCTCGTTCCGGAACTCCCGAAACTTCGACGTCCGACTGGCGCGGCACCGCCGGGCGTTCGAGGACGACCTGGTCGCCGGCCGGCTCCGGGGGGTCGTCGTCCTCGCGTCCGACTTCGCCGCCCGGCTCGGCCGGGGCGAGACGGCCCCGGTGCAGGTGATCGTCGACGGCACCGACCCGAACACGGCCGGGCTGGTCCAGTTCTACGTGCAGGGGGCCTGGGCGAACTGGCTCGAGCAGGAGCGGGTCGCGAGGGCCGGGCTCGCCGCCCGGGAGGGGAGCGAGCCACGCGTCTCCGTCGAGCCCCGGTACTGGTTCAACCCGGAGCTGAGGAGCCAGAACTTCTTAATCCCCGGCTCGATCGCCATCATCATGTCGCTGATCGGCACGCTCCTGACGGCCCTGGTGGTCGCCCGGGAGTGGGAGCGGGGGACGATGGAGGCCCTGATGGCCACCCCGATCGGCGTCGTGGAGCTCCTCGTGGGCAAGCTGCTCCCCTACTTCGTCCTGGGCATGGCGGCGATGGGCCTCACGGCCGCACTGGCCGTCTTCGTCCACGGGGTCCCGTTCCGGGGCTCCGTCGCCGCGCTTTTGGGCATCTCCTCGGTCTTCCTCGTCGCGATGCTGGCGCTCGGGCTCCTGATCTCGACGGCGACCCGCAACCAGTTCGCGGCCAGCCAGGTGGCCCTGATCGCGGCGTTCATGCCGGCGTTCGAGCTCTCCGGGTTCATCTTCGAGATCGACAGCATGCCCCCCCCGATCCGTTGGCTGACCTACGCGTTGCCGGCCCGCTACTTCGTCCCCAGCCTCCAGACGATCTTCCTGGCCGGCGACGTCGCCGGGGTCCTCGTGCCGAACGTGATCGCGCTGGGGGCGATCGCGACGGTGCTGATGACGCTCCTCGTCCGCTCGACCCGGATGAGGCTGGAGTGA
PROTEIN sequence
Length: 386
MTEPSRGGASALRRVAGLVRKETFQIVRDPSSYLIAGALPMLLLFLFAFGVSLDLGRVPIGLVVERPTPEADSLVASFRNSRNFDVRLARHRRAFEDDLVAGRLRGVVVLASDFAARLGRGETAPVQVIVDGTDPNTAGLVQFYVQGAWANWLEQERVARAGLAAREGSEPRVSVEPRYWFNPELRSQNFLIPGSIAIIMSLIGTLLTALVVAREWERGTMEALMATPIGVVELLVGKLLPYFVLGMAAMGLTAALAVFVHGVPFRGSVAALLGISSVFLVAMLALGLLISTATRNQFAASQVALIAAFMPAFELSGFIFEIDSMPPPIRWLTYALPARYFVPSLQTIFLAGDVAGVLVPNVIALGAIATVLMTLLVRSTRMRLE*