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berkeley_reactor_200306_planktonic_scaffold_18693

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_18693_1
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100..726)
DNA (627bp) protein (209aa)
Putative transcriptional regulator n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A229_METMM
Uncharacterized protein {ECO:0000313|EMBL:AIE20293.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_18693_2
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(723..4841)
DNA (4119bp) protein (1373aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5878
Restriction enzyme and modification methylase {ECO:0000313|EMBL:KIE09901.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_18693_3
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5360..8512)
DNA (3153bp) protein (1051aa)
helicase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5877
Helicase {ECO:0000313|EMBL:KIE09902.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
SNF2 family helicase-like protein
berkeley_reactor_200306_planktonic_scaffold_18693_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8849..9319
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D6R3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25099.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_5
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(9438..10193)
DNA (756bp) protein (252aa)
methyltransferase type 11 n=1 Tax=Schlesneria paludicola RepID=UPI00029B0C1D
type 12 methyltransferase
Tax=BJP_IG2157_Anaerolineales_55_23
berkeley_reactor_200306_planktonic_scaffold_18693_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10319..11155)
DNA (837bp) protein (279aa)
Metal-dependent hydrolase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D798_SINAD
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AGA24708.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11349..12779)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIY5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28778.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_8
uncultured Acidobacteria bacterium A2, Acidobacteria, Bacteria

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comp(12769..15102)
DNA (2334bp) protein (778aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A2 RepID=F8TTF1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26462.1}; TaxID=1036852 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A2.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_18693_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15522..16772
DNA (1251bp) protein (417aa)
FG-GAP repeat protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8D4_SINAD
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:AGA25098.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17262..18380
DNA (1119bp) protein (373aa)
secretion protein HlyD n=1 Tax=Schlesneria paludicola RepID=UPI00029AAED6
Uncharacterized protein {ECO:0000313|EMBL:EGW49920.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_18693_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18384..20123
DNA (1740bp) protein (580aa)
ABC transporter ATP-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABBF1
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM31439.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter-like protein
berkeley_reactor_200306_planktonic_scaffold_18693_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20120..21277
DNA (1158bp) protein (386aa)
ABC transporter ATP-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABBF1
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ACI56269.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
berkeley_reactor_200306_planktonic_scaffold_18693_13
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21282..22391
DNA (1110bp) protein (370aa)
membrane protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A6496
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:EMG36378.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
ABC-2 type transporter
berkeley_reactor_200306_planktonic_scaffold_18693_14
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22663..23070
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXJ5_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV63043.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
berkeley_reactor_200306_planktonic_scaffold_18693_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23183..24166
DNA (984bp) protein (328aa)
Putative NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D777_SINAD
NAD(P)H quinone oxidoreductase, PIG3 family
Putative NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:AGA25097.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24080..24835)
DNA (756bp) protein (252aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8X9_SINAD
antimicrobial peptide ABC transporter ATPase
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGA25096.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25008..26228)
DNA (1221bp) protein (407aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8A0_SINAD
lipoprotein release ABC transporter permease
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGA25095.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_18693_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26504..28540
DNA (2037bp) protein (679aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0D6Q8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25094.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 18 items

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