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berkeley_reactor_200306_planktonic_scaffold_25274_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 231..572

Top 3 Functional Annotations

Value Algorithm Source
ltrA; group II intron reverse transcriptase/maturase (EC:2.7.7.49) similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 101.0
  • Bit_score: 85
  • Evalue 9.60e-15
RNA-directed DNA polymerase id=24574720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 104.0
  • Bit_score: 111
  • Evalue 3.40e-22
Marine sediment metagenome DNA, contig: S01H1_S31101 {ECO:0000313|EMBL:GAG37526.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 107.0
  • Bit_score: 108
  • Evalue 5.20e-21

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 342
GTGGGACCGCGACCGTCGCGGAAGAAGATCAACCGGCTATGCGGCGAGATCAGTGAACTGACGGAGCGGCGTACGACGTCGCTGGCGGTCGAGGAGCAGATAGGGCGGATCAACCGCAAACTACGCGGCTGGTCCAGCTACTTCCGCATCGGAACCGTCAGCCATGCCTACCGCAGCGTCGACAGTCATGTCCGCTTTTGGGTGCGTCAGTGGCTGTGCGCGAAGTTCAAGGTACCGGGTCAGGGTAAAGCACAGTACCCCGACGCCTACCTGAGTGGGGAGCTGAGGCTCCACCAACTCCAAAGGACCTCGCGTCCCCGCCGTTCGTGTGCGAAGGGGTGA
PROTEIN sequence
Length: 114
VGPRPSRKKINRLCGEISELTERRTTSLAVEEQIGRINRKLRGWSSYFRIGTVSHAYRSVDSHVRFWVRQWLCAKFKVPGQGKAQYPDAYLSGELRLHQLQRTSRPRRSCAKG*