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berkeley_reactor_200306_planktonic_scaffold_32477_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1353..2756

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 467.0
  • Bit_score: 854
  • Evalue 5.30e-245
3-isopropylmalate dehydratase large subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH33_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 467.0
  • Bit_score: 854
  • Evalue 3.80e-245
3-isopropylmalate dehydratase large subunit similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 467.0
  • Bit_score: 854
  • Evalue 1.10e-245

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1404
ATGTCCGAGACGCTGTTCGAGAAGGTATGGAAACGCCATCAGGTTGCGACGACCGATGAGGCCACGCTGCTTTATATCGACCGGCACCTGGTCCACGAGGTGACGAGCCCGCAGGCGTTCGACGGGCTCCGCATGGCCGGGCGCAAGGTCCGCCGGCCCGATCTGACGTTCGCCACGCTCGACCACAACGTGCCGACCGAGAACCAGCTCGACATCCGCGAACCGATGTCGAGGCGCCAGGTCGAGGCGATGCGGGCGAACTGCCGCGAGTTCGGCGTCACGCTCTATGACATCGGCAGCGGCCGGCAGGGGATCGTCCACGTCATCGGCCCCGAGCTCGGGATCACCCTCCCCGGCACGACCATCGTCTGCGGCGACAGCCACACCAGCACCCATGGCGCCTTCGGCGCCCTGGCCTTCGGCATCGGGACCAGCGAGGTCGAGCACGTCCTCGCGACGCAGACCCTCTGGCAAGGCCGCCGTCCGAAGTCGCTCGGCATCGAGGTCACCGGGACCCTCGCCCCCGGCCTCGAGCCCAAGGACATCATCCTGGCCGTCATCCGGGCAATCGGCACGGGCGGGGCCACGGGCCACGTCATCGAGTACTACGGCCCGGCGATCCGCGCCCTCTCGATGGAAGGCCGGATGACCGTCTGCAACATGTCGATCGAGGCCGGGGCCCGCGCAGGGCTGATCGCCCCCGACGACACGACGTTCGAGTACATCGCCCGAGGCGAACGGCCGTTCGCCCCCAAGGGAGCGGCCCTCGACGCCGCGATCGCCGACTGGAAGACGCTGAAGACCGAGGACCCGTCCGCCTTCGACCGGCATATCCAGGTCGACGCGTCGAGCCTCGTGCCCCAGGTCACCTGGGGGACCAACCCGGCGATGACCGTCGACGTCACCGGCCGGATCCCCGACCCCGAACACGTCCCGTTCGCCAGCCGGGATGACGCCCGCCGGGCCCTCGACTACATGGGCTTGACGCCGGGCACCCCGATCGCCGAGATCCCCGTCGACATCGTCTTCATCGGCTCGTGTACGAACGGCCGGATCGAAGACCTACGCACGGCCGCCAAGGTGTTCGAAGGGCGCAAGGTCGCCCCGGGCGTGCGGGCGCTCGTCGTCCCGGGGAGCGAGCAGGTCCGGCATCAGGCCGAGGCCGAGGGGCTCGACCGCGTGTTCTCCCGGGCCGGGGCCGAGTGGCGCGAGGCCGGCTGCAGCATGTGCCTTGCCATGAACCCCGACAAGCTGACCCCCGGTCAGCGCTCCGCCAGCACGAGCAACCGCAACTTCGAGGGACGGCAAGGCCCCGGCGGCCGCACCCACCTCGTCAGCCCCGCCATGGCCGCCGCCGCCGCCGTCACAGGGCACTTCACCGACGTCCGCCAGTTGCTCAACTGA
PROTEIN sequence
Length: 468
MSETLFEKVWKRHQVATTDEATLLYIDRHLVHEVTSPQAFDGLRMAGRKVRRPDLTFATLDHNVPTENQLDIREPMSRRQVEAMRANCREFGVTLYDIGSGRQGIVHVIGPELGITLPGTTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTLWQGRRPKSLGIEVTGTLAPGLEPKDIILAVIRAIGTGGATGHVIEYYGPAIRALSMEGRMTVCNMSIEAGARAGLIAPDDTTFEYIARGERPFAPKGAALDAAIADWKTLKTEDPSAFDRHIQVDASSLVPQVTWGTNPAMTVDVTGRIPDPEHVPFASRDDARRALDYMGLTPGTPIAEIPVDIVFIGSCTNGRIEDLRTAAKVFEGRKVAPGVRALVVPGSEQVRHQAEAEGLDRVFSRAGAEWREAGCSMCLAMNPDKLTPGQRSASTSNRNFEGRQGPGGRTHLVSPAMAAAAAVTGHFTDVRQLLN*