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berkeley_reactor_200306_planktonic_scaffold_32477_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 31784..33055

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 424.0
  • Bit_score: 662
  • Evalue 2.10e-187
Diaminopimelate decarboxylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDD9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 424.0
  • Bit_score: 662
  • Evalue 1.50e-187
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 424.0
  • Bit_score: 662
  • Evalue 4.20e-188

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1272
ATGAAGGCCACCGCCCCGCTTGACCTGCGGACCACCATAGCCGGGATCCCCGTCCGCGACCTCGCCGACCGATTCGGGACCCCGACGTACGTCTACGACGGCGCCACGATCGTCGAGCGGATCGGGGACCTCAAGCCCTTCGACGCGATCCGATACGCGCAGAAGGCGAACTCGAACCTCGCCATCCTCGACCTGGTCCGCCGCCACGGCGTCCTGGTCGACGCCGTGAGTGCCGGGGAGATCGGCCGCGCCTTGGCCGCGGGCTACCGGCCCGAAGGCGATCCCCATCCGATCGTGTATACGGCCGACATCTTCGACCGCGAGTCCCTCGACCTGGTCGTCGAGAAGGGCATCCATGTCAATTGCGGCTCTCCCGACATGATCGACCAGTACGGGGAACGGGTCCCCGGCGGGTCGATCACCCTGCGGATCAATCCCGGCTTCGGCCACGGACACAGCCAGAAGACGAACACCGGGGGCGAGTCTTCGAAGCACGGCATCTGGCACGATCAAATCGGCGACTGCCTGTCCCGGGCCGCCCGGCACAAGGTGAAGATCACCGGGCTGCACATGCACATCGGCTCCGGCACGGACCTGGAGCACCTCTCCCAGGTCTGCGGGGCGATGGAGCGCGTCGCCCGGGAGATCGCCCCCACCCTCGACACCATCAGCGCCGGCGGCGGCCTGCCGACCCCGTACCGGCCGACGGACGGCCGGGTCGACATCGACGCCTACGTCCGCCTCTGGGACTCCACGCGCAAGCGGCTCGAGGCGGCGGCCGGACACCCACTCCGCCTGGAGATCGAGCCGGGCCGCTACCTCGTCGCCGAGAGCGGCTTCCTGCTCGCCGAGGTCCGTGCCGTCAAGCGCATGGGTGGCAATACCTTCTATCTGGTCGATGCCGGGTTCAACAACCTAGCGCGTCCCATCCTCTACGGCGCCTACCACCCCATGTCGGTCTCCCCGGCCGACGGCGCGTCGGATCGTCCCCGCCGAGCGGTCGCGGTCGGCGGCCCACTCTGCGAGAGCGGGGACATCTTCACCCAGGACGAGGGGGGCTTCGTCTGCACTCGCGAGTTGCCCGAGGCGAGCGTCGGCGACCTCCTGATCATCGAATGCGCCGGCGCCTACGGGTTCGCGATGGGCTCGAACTACAACTCCAAGCCGTTGGCGGCCGAGGTCCTCATCCTCGACGGCCATCCCCACCTGGCGCGGCGACGCCAGACCTTTGAAGATCTGATCCGTGGGGAGTCGATCCCGAAGCTCGATTGA
PROTEIN sequence
Length: 424
MKATAPLDLRTTIAGIPVRDLADRFGTPTYVYDGATIVERIGDLKPFDAIRYAQKANSNLAILDLVRRHGVLVDAVSAGEIGRALAAGYRPEGDPHPIVYTADIFDRESLDLVVEKGIHVNCGSPDMIDQYGERVPGGSITLRINPGFGHGHSQKTNTGGESSKHGIWHDQIGDCLSRAARHKVKITGLHMHIGSGTDLEHLSQVCGAMERVAREIAPTLDTISAGGGLPTPYRPTDGRVDIDAYVRLWDSTRKRLEAAAGHPLRLEIEPGRYLVAESGFLLAEVRAVKRMGGNTFYLVDAGFNNLARPILYGAYHPMSVSPADGASDRPRRAVAVGGPLCESGDIFTQDEGGFVCTRELPEASVGDLLIIECAGAYGFAMGSNYNSKPLAAEVLILDGHPHLARRRQTFEDLIRGESIPKLD*