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berkeley_reactor_200306_planktonic_scaffold_78803_35

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(34955..37315)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Singulisphaera acidiphila RepID=L0DIK4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 347.0
  • Bit_score: 244
  • Evalue 3.00e-61
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 347.0
  • Bit_score: 244
  • Evalue 8.60e-62
Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 530.0
  • Bit_score: 275
  • Evalue 1.30e-70

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Taxonomy

RBG_13_Planctomycetes_63_9_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2361
ATGGCAACTCGCCGGGCGGACGTGGTTGCGAAGTCGTTGCAGGGCCTCTTCGAGGGAGGGGCCGCCGCGGGGTTGTCGGACGGGGAGTTGCTCGCCCGGTTCGTCGCCCGACGCGGCGATTCGGCCGAGCAGGCCTTCAGCGTCCTTGTGGCGCGGCACGGGTCGATGGTCCTGGCCGCCTGCCGAGGATTGCTTGGTGACGACCACTCCGCCGAGGATGCGTTCCAGGCGACGTTCCTCGTCCTCGCCCGAAAGGCCGGGACGATCCGAGAGCCGAACCTCCTCGGCCCCTGGCTCTACGGCGTCGCCCTCCGCACGGCGAGGAAGGCCCGCGGGCGGGCGGCCGGCCTCGAGGCGAGAGGAGGGCCGGCGTCCGAGCCGGTCGATGACCTGCGTCCCGAACAGGCGACGATCCGACGCGAGGAAGTCGCGCTGCTCCATGAGGAGCTCGGGCGGCTGCCGGAGTCGTATCGCCGGCCGATCCTCCTCTGCGACCTCGAAGGGCTCTCCCACGCCGAGGCCGGGCACCGGCTCCATCTCTCCGCCAACACGGTCAGCGCCCGCCTGAGCCGGGGCCGCAGGCGCCTCCGGAGCCGGCTCGTCCGGCGTGGCTTGGCCCCTTCGGCGGCCCTGATCACCGCCCAGGCCACTTCCGCGACCGTGCCCGCCGCACTCGAGGCGGCCACCGTCCGCGCCTCGGCGGCCTTCGCGACGGGCCACGTCACTCAAGGGTCCATCCCGGCGACGGTCGCCGCGCTGGCCGAGGCGATGGTCCGAGCCAGTTCCTTCTCCGTCCGCAAGGCCGTCGCCGCGGGGGCGGCGCTGCTCCTCCCCGCGGGCGCGGCCGTCGTCCTGGCCGGCGGCGAGGCCCCCAGGCGGGCCGAAGCCCCCAGGGCCGTCGAGAAGGCCCCCGACACTTCGAAGGGACCCATCCCGTCCTTCCCCGGCGCGGTGACTCGGGCCCCGGACTGGATCAGCCCCCGGGCCCCCTTCGACGTCGCCAGGTACTTCGAGCTCCCCGCGCCCGAGGAAAACGCGGCGCCCCTCTACCTCGACGCCCTCTTCGAGTTCAGCAATGAGCTCGCCATCTGCTTCCCGGAAGGGCCCGCGCGGCAGGCGAGGAGCCAAGCCCTCGAGGAGCGAGGCAAGCGGTTCGGCGAGCTCCTGGTGGCCTCTGCGAATGCCCCAAAGGCCGTTACGGCCGCGATGATCGACGAGGCCATCGCCCCCTACGCCGAGGGGTTCCGGAAGCTCGCCGAGGCCCAGCGCCGACCGCGTTGCGTCTTCGCGGCCGGCCTGGGCCTAACCGCTCGGCTACCCCACGTCCAGGGGGCCCGCCAAGTCGGTCGCATCGCCGCCTACCGGATCCGACGCGACCTCGAACGGGGAGAGATCGACGCCGCGATCCGCGACCTCGCGATCACCCTCCGCCTCGCCCGAGACCTCCGCCCCCGCGGGGGCATGGTCATGCAGTTGGTCGCCGCGTCCCTCGACGCGACGGTCATCAAGGATGGGCTACTGCCGATCCTCGCCTCTCCCCAAATCCGCCCCGAACACGCCGACCGACTCCTCGCGATCTTCCGGGAGGATCTCCGCGAGTCCGTCGATGGATACGCCGAGGGGATGCGCGAAGAGTACCTCACGCACGTGAAAACCATCCGGGACCTGGTCTACGACCAGCCCGCGCTCGCCCGCGACCTGAAAGGGTTCGGCTCCCTCGATCCGAGCGGGTCGGTCGTCCTCTCGCTCGTCGAGCCCCGATTGATCTCGGCCCTGTCGACGAAGGCAGCCCCCGCGGCCCCGCCTCGCCCCGCCCCACCACGCCCGGTCTGGCCGGAGGACATCGACGCCCAGGTCGCGAAGACGACGCCCGAGGAGCTCGCGAGGCTGGTCGCCCGGCTCGACGAATATTATCGACGCCAGCTCACCCTCCGGTCGTTTCCCTACCTCACGCGGCTCGAGAAGGCCCCCGACCGCACCCTCGCACTGGGCGGTGACGACCTCCTCTCCCGCGTAGTCGTAGGGACCAACTCGAGCCTGGTGTTCTTGGTGCGGGCTCAGGGGGTCAACATCGCTCGACTCCACGCCTCGGAATGCCTGATCGCCCTCAAGCGGCAACGGCTGACCCACCCCGACTCCCCGTTCGACCTCGCCGCGGCCGCCCGCGACGCGGGCCTCGAGGCCATCCCCGCCGACCCCTTCGACGACAAACCGATGCGCTTGGCGATCATCGACGGCGAACCCGTCATCTATTCGATCGGCCGCGACGGCCTAGATGGCGGCGGACTCGTCGACTCTCGGAATGACTCCCACCCGGGAGATTTGACCTTCCGATTTTCGATTCCGGCATCTCCGAAGTGA
PROTEIN sequence
Length: 787
MATRRADVVAKSLQGLFEGGAAAGLSDGELLARFVARRGDSAEQAFSVLVARHGSMVLAACRGLLGDDHSAEDAFQATFLVLARKAGTIREPNLLGPWLYGVALRTARKARGRAAGLEARGGPASEPVDDLRPEQATIRREEVALLHEELGRLPESYRRPILLCDLEGLSHAEAGHRLHLSANTVSARLSRGRRRLRSRLVRRGLAPSAALITAQATSATVPAALEAATVRASAAFATGHVTQGSIPATVAALAEAMVRASSFSVRKAVAAGAALLLPAGAAVVLAGGEAPRRAEAPRAVEKAPDTSKGPIPSFPGAVTRAPDWISPRAPFDVARYFELPAPEENAAPLYLDALFEFSNELAICFPEGPARQARSQALEERGKRFGELLVASANAPKAVTAAMIDEAIAPYAEGFRKLAEAQRRPRCVFAAGLGLTARLPHVQGARQVGRIAAYRIRRDLERGEIDAAIRDLAITLRLARDLRPRGGMVMQLVAASLDATVIKDGLLPILASPQIRPEHADRLLAIFREDLRESVDGYAEGMREEYLTHVKTIRDLVYDQPALARDLKGFGSLDPSGSVVLSLVEPRLISALSTKAAPAAPPRPAPPRPVWPEDIDAQVAKTTPEELARLVARLDEYYRRQLTLRSFPYLTRLEKAPDRTLALGGDDLLSRVVVGTNSSLVFLVRAQGVNIARLHASECLIALKRQRLTHPDSPFDLAAAARDAGLEAIPADPFDDKPMRLAIIDGEPVIYSIGRDGLDGGGLVDSRNDSHPGDLTFRFSIPASPK*