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berkeley_reactor_200306_planktonic_scaffold_88353_9

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(17239..18366)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 374.0
  • Bit_score: 652
  • Evalue 3.20e-184
Transcription termination factor Rho n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNT4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 374.0
  • Bit_score: 652
  • Evalue 2.30e-184
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 374.0
  • Bit_score: 652
  • Evalue 6.50e-185

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1128
ATGAGCATGGCCGAACTGAGCTGTTCGGGTGTCCTGGAGATGCACCCCAAGGGATATGGATTCCTGAGGGACCCCGCGCGGAATTTTAAAGCGGGGACGAACGACGTCTACGTCGGGGCCCCGTTGCTGGCCAGGTTCCGGCTCCGACAAGGGGTCCGCCTGACCGGCCGAGCCGCGCCGCCCCCCTCGAAAGGGGAGGCGATGCGCCTGGCGGAGCTGACCGAGATCGAGGGGTGCGAGCCGGAGCGATACCTCAACCTCCGGGGCTTCGACGAGTTGACCGCGATCGACCCTCACGACCGGCTCCGGCTCGAAGTCGGCCCCGAGCCGCTCGGCATGCGCGTCATGGACCTGCTCACGCCGATCGGGAAAGGTCAGAGAGGCCTGATCGTGGCGCCCCCGCGGTCGGGCAAGACGATCCTGCTCCAGCAGTTGGCGGGCTCGATCGCGAAGAACCACCCCGAGGTCCACCTGTTCGTCCTCCTGGTCGACGAGCGGCCCGAAGAGGTGACCGAGATGCGTCGGAGCGTCCGGGGCGAGGTCATCGCCTCGTCGTCCGACCACGCCCCCGAGGAGCACATCCGGCTCGCCCAGCTCACCGTCGACCGCGCCAAGCGGATCGCCGAGACGGGGGGACAGGTCCTGATCCTGCTCGACAGCCTCACGAGGCTGGCCCGCGCCTACAACAAGGGGTCGAACTCGGGCCGGACGATGTCGGGAGGGATGGACATCAAGGCCATGGACGTCCCCAAACGCCTCTTCGGCGCCGCCCGGACGTTCGACGAGGGGGGCTCCCTGACCGTCCTGGCCACCGCCCTGATCGACACCGGCAGCCGGATGGACGAGCTCATCTTCCAGGAGTTCAAGGGAACCGGCAACATGGAGGTCGTCCTCGACCGACGGCTCGCCGACCGTCGCGTCTGGCCCGCGATCGACATCCAGCAGTCGGGCACCCGCAAGGAAGAACGGCTCCTCGACCCCCTGACCCTCTCCCGCGTCAACCTCCTCCGCCGGAGCCTCTCCGAGCTCAAGCCGACCGACGCGATGGAGTCGCTCGTCCGCCAGCTCTCCAAGTTCCCCTCGAATGCGGAGTTCCTGGAAAAGATAGGTCAGTTCCAGAAACCCTAA
PROTEIN sequence
Length: 376
MSMAELSCSGVLEMHPKGYGFLRDPARNFKAGTNDVYVGAPLLARFRLRQGVRLTGRAAPPPSKGEAMRLAELTEIEGCEPERYLNLRGFDELTAIDPHDRLRLEVGPEPLGMRVMDLLTPIGKGQRGLIVAPPRSGKTILLQQLAGSIAKNHPEVHLFVLLVDERPEEVTEMRRSVRGEVIASSSDHAPEEHIRLAQLTVDRAKRIAETGGQVLILLDSLTRLARAYNKGSNSGRTMSGGMDIKAMDVPKRLFGAARTFDEGGSLTVLATALIDTGSRMDELIFQEFKGTGNMEVVLDRRLADRRVWPAIDIQQSGTRKEERLLDPLTLSRVNLLRRSLSELKPTDAMESLVRQLSKFPSNAEFLEKIGQFQKP*