ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_88353_88

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(117363..120620)

Top 3 Functional Annotations

Value Algorithm Source
Putative PAS/PAC sensor protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYM8_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 672.0
  • Bit_score: 319
  • Evalue 1.00e-83
putative PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 672.0
  • Bit_score: 319
  • Evalue 2.90e-84
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABQ91731.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 672.0
  • Bit_score: 319
  • Evalue 1.40e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseiflexus sp. RS-1 → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3258
TTGTTCACCCCCCTCGACGAACAGGAACGCCTGGCCGCACGCGGCCACCACGCTATCTTTGAAGCCGCACCGTCGAAGGCCTTCGACGACCTGGCGAGGCTGGCCGCTCACGCCTGCGGGGTGCCGGTGGCCCTGGTGAGCCTTCTCGACGCGACCCGTCGGTGGTCCGAGGCCCGATTCGGCCTCAAGGCGGCCGAGGGCCCGATCGACGCCTCCTTTTGTGCGCATGCGATCCGCGGCCGAGGGCTGTTCGTGGTCCCCGACGCGAAGGCCGATCCCCGCTTTGCCGACAACCGGTACGTGGAAGGAAGCCCGGGGGTCCGATTCTATGCCGGCTCCCCGCTGATCGACACCCAGGGCCATCCGCTGGGGACGCTCTGCGTCATCGACTATATCCCCCGTACTCTCACTCCGGTCCAGGCGACGATGCTGTCGAGCCTGGGCCGCCAGGCCGTCGCCCTGCTCGAGCTCCGCGGCGCCCTGGCGAGGGCGAGGCAGGCGGAGGCGCAGGCTCGCGCGGCCACTGCTCGCGAATCGGCGTCCGGCGCGATCGAGAGGTCCGGCTCTCGGAGCCCATTGCAGGAGGTTAATGCGGTGCCCGAGCGATTCCTCGGCTCCCCGAGCGAGCACGCCACCGGCTACCCCATGGGGGACCCGGTCTCGTCTCCCGATGGCCGAGGGATCGTCTCGTTCCGCGACGACTCGGAGCGAGGGAGGAACGAGGATGCCCAGCGGCTGCTCGCCGCCATCGTCGAGTCCTCCGACGACGCGATCGTGACCAAGGATCTCGACGGGATCGTGACGAGTTGGAACGGTGGCGCCGGGCGCATCTTCGGCTACTCCCCGGAGGAGGCGATCGGCCGGCATATCTCCTTCCTCCTGCCGCCCGATCGGGCCGACGAGGCGGCGAAGGTCCTGGGCCGAGTCCGGTCCGGCGAGCGGGTGGACCACTACGAGACCAGGCGGGTCACCAAGGACGGCCGGATCCTCGACATCTCGCTGAGCGTCTCGCCGGTCTGCGACGCCGAGGGCCGGATCGTCGGCGCCTCCAAGGTCGCCAGGGACATCACGGAGCGGAAGCGGTCCGAGGAGGCGCTGAGGCGGAGCGAGGCCGAGGCCAGGCGGCTCGCCCTGGTCGCCAGCCGGACCGACAATGCCGTCATCATCACCGACGCCGCCGGCCGGATCGAATGGGTCAACGAGGCCTTCGCGCGGATCACCGGCTACGCCCTCGAAGAGGTCGTCGGGCGCCGCCCCGGCTCCTTCCTGCAAGGGCGCGGGACCGACCCCGAGACCGTCCGGCGGATTCGGGCCAGGCTGGCCGCCGGGGAGGGATTCACCGAGGAGATCCTCAACTACAGCAAGTCGGGCCGGGAATACTGGCTGGCCATGGACATCCAGCCGATCCGCGACGAGGCGGGCGCCCTGACGAACTTCATCGCCATCGAGAGCGACGTCACGGACCGTAAGCGGGCCGAGGCCGAGTTGCGCCTGGCCCATGACGAGCTGACGCGGGCCCGCGATCAACTCGAGGAGCGGGTCCGAGTCCGGACCGCCGAGCTGGCCGCGCAATCCGAGACGCTCCGACGCGCCGAGGAGGACTACCGGGGCATCTTCGAGAACGCCGTCGAGGGGATCTACCAGAGCTCCGCGGGGGGCCGCTACGTGCGGGCCAACCCGGCCCTGGCCCGGATGCTCGGATACGCCGGCCCCGACGAGCTGATCGCCGACGTGCACGACATCGCCCGTCAGCTCTACGTCGACCCGGGGAGGCGGGAGGAGTTCTGCCGGCTCGTCGACGAACGTGGGTCCGTCTCCGGGTTCGAGTCGCGGGTCCGCCGCAAGGACGGCCGGGTCATCTGGATCTCCGAGAACGCCCGCGCGGCCCGGTCCGGGGACGACGGCGTGGTCCGTTACGAAGGGATCGTCGCGGACATCACCGAGCGTCGCCGGGCCGAGACGAAGATCCGCGCCCTCAACACCGAGCTCGCCTCGGCCTACGACGCGACGATCGAGGGCTGGGCCAAGGCGTTGGACCTCCGCGACAAGGAGACTGAGGGGCACACCCGCCGCGTCACCGAGATGAGCCTCCGGCTGGGCCGCGCCCTGGGCTTGGGGGACGAGGACCTGGTCCACATCCGTCGAGGCGCCTTGCTGCACGACATCGGCAAGCTGGGCGTACCGGACGCCATCCTGCTCAAGCAGGGCCCGCTCACCGACGAGGAGTGGGTCGTCATGCGGCGCCACCCGTCCAATGCCCGCGACTGGCTGCACACGATCCCGGTACTCCGGCCCGCCCTGGAGATCCCCTACAGCCACCACGAGCGTTGGGACGGCACCGGCTATCCGCAAGGGCTGGCCGGCGAGGCGATCCCCCTGTCGGCCCGGCTCTTCGCCGCCGTGGACGTGTGGGACGCGCTGCGCTCCGACCGGCCGTATCGTGCGGCCTGGCCCGAGGACCGGGTCCGCGAACACCTGAAGGGCCTGGCGGGCACCCATCTCGATCCGTTGATCGTGGCGACCTTCCTGCGCGTCCTCGATGACCCCTCGCCCGTCCGGGACGCCGGGAGCCCGCCCACTGCCCCTGTCCATGCCCCCGGTGCCGCGACGGCTTCGCCGAGCCTCAGGCGGGGCGACGTCGTGGAGAGGCCGCTGTCGGGGCCTCGAAGGCGACGGGAGGGGCGGCTCGCGCGGCCCAAGGAGCTGGAGCGGGACAACGCCCGGCTGGCCGAACTCGCGACCACCGACGACCTGACGGGCTTGTGGGACCGCCGTCACTTCCGGCAAGCCTTGCAAATCGCCTTCGACGACGCCAAGAGGGGGGGGCAGCCCTTGACCCTGGTGTTGCTCGACCTCGACCGGTTCAAGGCCTACAACGACGAGTACGGACACCCCGCCGGCGATGAAGTGCTCCGGGAACTCGCCTCACTCCTCCGTAGCGAGATGCGCGTCGACGACGTCGTCGCCCGCCACGGCGGCGAGGAGTTCGCCGCCCTCCTCCCCGCGACCGATGCGGCGGGCGGTCGGGCCTGGTCCGAGCGATTGCGCGCGGTCATGGCGGACCATCGCTGGCCGCGCTCGCCCGTGACGGCGAGCTTCGGCCTCTCCACACTGACCCGCGGGACGGTCGCCCCGGCGATCCTGATCGAGCAAGCCGATCGGGCGATGTACCGGGCCAAGAGGCTCGGCCGCGACCGGGTTTCGCATTTCGACGAATTGACCGACTCGTGCCTCGTCGACAGCGTCCCGCCATTGTAA
PROTEIN sequence
Length: 1086
LFTPLDEQERLAARGHHAIFEAAPSKAFDDLARLAAHACGVPVALVSLLDATRRWSEARFGLKAAEGPIDASFCAHAIRGRGLFVVPDAKADPRFADNRYVEGSPGVRFYAGSPLIDTQGHPLGTLCVIDYIPRTLTPVQATMLSSLGRQAVALLELRGALARARQAEAQARAATARESASGAIERSGSRSPLQEVNAVPERFLGSPSEHATGYPMGDPVSSPDGRGIVSFRDDSERGRNEDAQRLLAAIVESSDDAIVTKDLDGIVTSWNGGAGRIFGYSPEEAIGRHISFLLPPDRADEAAKVLGRVRSGERVDHYETRRVTKDGRILDISLSVSPVCDAEGRIVGASKVARDITERKRSEEALRRSEAEARRLALVASRTDNAVIITDAAGRIEWVNEAFARITGYALEEVVGRRPGSFLQGRGTDPETVRRIRARLAAGEGFTEEILNYSKSGREYWLAMDIQPIRDEAGALTNFIAIESDVTDRKRAEAELRLAHDELTRARDQLEERVRVRTAELAAQSETLRRAEEDYRGIFENAVEGIYQSSAGGRYVRANPALARMLGYAGPDELIADVHDIARQLYVDPGRREEFCRLVDERGSVSGFESRVRRKDGRVIWISENARAARSGDDGVVRYEGIVADITERRRAETKIRALNTELASAYDATIEGWAKALDLRDKETEGHTRRVTEMSLRLGRALGLGDEDLVHIRRGALLHDIGKLGVPDAILLKQGPLTDEEWVVMRRHPSNARDWLHTIPVLRPALEIPYSHHERWDGTGYPQGLAGEAIPLSARLFAAVDVWDALRSDRPYRAAWPEDRVREHLKGLAGTHLDPLIVATFLRVLDDPSPVRDAGSPPTAPVHAPGAATASPSLRRGDVVERPLSGPRRRREGRLARPKELERDNARLAELATTDDLTGLWDRRHFRQALQIAFDDAKRGGQPLTLVLLDLDRFKAYNDEYGHPAGDEVLRELASLLRSEMRVDDVVARHGGEEFAALLPATDAAGGRAWSERLRAVMADHRWPRSPVTASFGLSTLTRGTVAPAILIEQADRAMYRAKRLGRDRVSHFDELTDSCLVDSVPPL*