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berkeley_reactor_200306_planktonic_scaffold_105867_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 32649..33041

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2B6M6_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 124.0
  • Bit_score: 71
  • Evalue 4.50e-10
DNA-binding protein {ECO:0000313|EMBL:EMB17874.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 124.0
  • Bit_score: 71
  • Evalue 6.30e-10
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 94.0
  • Bit_score: 58
  • Evalue 1.40e-06

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Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 393
ATGACCGAGCGGCAACGGAAGGCGTGGGAGGCGATGACCCCGGAGCAGCGGGAGGCCGTTGAGCGTGTCCGGTCCAAGAACCGGACCTCAGCGGCCCAGGAGGCGCACGCAGAGGTGGCCGAAGCAGCGAGGATGGCGGTCCCCCCCATCGAGATCGACGAGCCACTCGCCTGCCTGGTGGCGGCGATGAAACTCGAGAGAGAGGCCCAGGGACTCTCCTTGGCCGATGTCTCCAAGCGCACGGGGCTGGATCCAGCGACGGTCAGCAAGATCGAGAACGGGCGACTACCCAACCCGACGTGGAGCACGCTTAGGGCGTACGGGAACGCTCTCGGAGTCCGGCTCGTCGTCGAGCTCGAGCGAGTCCCGGCGGATGCAGGACAAACACGTTGA
PROTEIN sequence
Length: 131
MTERQRKAWEAMTPEQREAVERVRSKNRTSAAQEAHAEVAEAARMAVPPIEIDEPLACLVAAMKLEREAQGLSLADVSKRTGLDPATVSKIENGRLPNPTWSTLRAYGNALGVRLVVELERVPADAGQTR*