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berkeley_reactor_200306_planktonic_scaffold_111214_29

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 40237..44025

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
transporter n=1 Tax=Schlesneria paludicola RepID=UPI000299EF58 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 1130.0
  • Bit_score: 1300
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 1111.0
  • Bit_score: 1158
  • Evalue 0.0
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ADB16958.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 1111.0
  • Bit_score: 1158
  • Evalue 0.0

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 3789
TTGATCTCTCGCTTCTTCATCGACCGGCCTATCTTCGCGTCGGTGCTCTCGATCGTCATCACCCTCGCCGGGGGGATCGCGCTGTTCGCGCTGCCGATCGCGCTCTATCCGCCGGTCTCGCCGCCGACCGTCCAGGTCGACTGCACCTACCCCGGCGCCAGCGCCCAGGTCGTGGCCGAGACGGTCGCCGTGCCGATCGAGCAGCAGGTCAACGGCGTCGAGAACATGATGTACATGTCGTCGCAGTGCACGAACGACGGCGCGTACAACCTCACCGTCACGTTCAAGCACGGCGTCAACCTGAACATGGCCCAGGTCCTGGTCCAGAACCGGGTCAGCCTGGCGCTTCCGAACCTGCCCGACGTGCTCAAGCAGACCGGCGTGACGACGCGGAAGAAGGCCCCCGACATCCTCCTCGCGATCGCGATCAACTCGCCGGGCGCCAAGCGAGACCAACTTTACCTGAGCAACTACGCGCTCATGCACCTCAAGGATGAGCTGGCCCGGATCCCCGGCGTCAGCGACATCAACATGATGGGCCAGCGCGATTACAGCATGCGCATCTGGGTCGACCCGGATCAGCTCGCGTCGCGGAACATGACGGCGAGCGACGTGGTCGCGGCGCTCCGCTCCCAGAACATGCAGATCGCCACCGGCCAGATCGGCCAGCCGCCGACCCCGGCCGGGCAGAAGATCCAGATCACCCTGAGCACGCTCGGCCGCCTCACCGACGTCGAGCAATTCGAGAACGTGATCGTCCGCGCCACCCCCGAGGGGAAGCTGGTCCGGATCAAGGACGTCGCCAGGGTCGAGCTCGGGGCCAAGAACCAGGACATCTCGGGGAAGGTGAATGGCAACCCGACGGTGAGCCTCGCGGTCTTCCAGCTCCCCGACGCGAATGCACTCGACGTCGCCGTCCTGGTCAAGGACAAGCTCAAGGAGCTCGCCGCCGACTTCCCCGATGGCGTCGGCTACGAGATTCGCTACGACACGACGCCGTTCATCCAGGAGTCGATCGACGAGGTCTTGAAGACGTTGTTCGAGGCGGTGGTCCTCGTCGCCATCGTCGTCCTCGTCTTCCTCCAGAGCTGGCGGTCGGCGATCATCCCCCTCGTCGCCGTGCCCGTCGCGATCGTGGGGACTCTCGCCGTGATGGCGGCGATGGGCTTCTCGCTCAACAACCTCACGCTCTTCGGCCTGGTTCTGGCGATCGGGATCGTGGTCGACGACGCGATCGTCGTCGTCGAGGCCGTCGAACACCACATCGAACACGGGATGTCGCCGAGGGACGCCACGATCAAGGCGATGGACGAGGTCTCGGGCCCGGTGATCGCGATCGGGCTGGTGCTGACGGCGGTGTTCGTGCCTTGTGCGTTCATCAGCGGGATCGTCGGGCAGTTCTTCCGGCAGTTCGCGCTGACGATCGCGACGTCGACGATCATCTCGGCGTTCAACTCGCTGACGGCGGTCGCGATCGGCTCGACGCTCGTCGGGCTCGTCGCGGGCTGGTTCGTCTCGAGGCTCCTGAACTGGTTCCTGGCGGGCTTCTTCTGGCTCTTCAACCTCGGCTTCCGGCACGCCACCAACGCCTATACGAAGCTGGTCGCGGGGATGCTCCGCGTCAGCGTCCTGGTCTGCCTCGGGTACGGGGCGCTGCTCTATCTGACCTACTGGGATTTCAACCACACGCCCAAGGGGTTCATCCCGTCCCAGGACATGGGGTATCTCCTGGTCAACGTCCAGCTCCCCGACTCCGCGGCGCAGGAGCGGACGATGGCCGTCATGGAACGGATGGAGAAGATCGCCCACACGATCCCGGGCGTGAAGCACACCCAGGCGACGTCGGGCATGTCGCTCCTCCTGAGTGCGAACGGCTCGAACTTCGGCTCGATGTTCGTGATCCTCGACGGTTTCGAGCATCGTCGCACGCCGGACCTCAGCAGCGATAGCATCGCCAAGAAGCTCCGCGAGAAGTTCGAGAAGGACGTCCCCGAGGCGATGCTCACCGTCCTCGGCCCCCCGCCGGTCCGCGGCGTCGGCCGCGCGGGCGGGTTCAAGTTCATGGTCGAGGATCGCGGCGACAACAAGCCCCAGACCCTCCAGGGGCAGACCGAGAATCTCGTCGACCGGGCGAAATCGATGAAGGTGGAGGCGAGCGAGGAGTCCCCTTGGGACTCACTGGTCGCCCTCTTCCGCAAGGGCCCGAAGAAGGAGGACAAGCCGGGTGGGGGGCAGCGTCCGGCGTTCGTCGGGCTCACCTCGGTCTTCCGCGCCAACGTCCCGTCGCTCTATGTCGACGTGAACCGGCGCGAATGCATGGCGAAGGACGTCCAGCTGAAGGACTTCTTCGACACCTTGCGGATCTACCTCGGGTCGCTCTACGTGAACGACTTCAACCGGTTCGGCCGGACCTGGCAGGTCATCGTCCAGGCCGATGCCAAATACCGGCACCGCGTCGAGGACGCGAAGCGGCTCAAGGTCCGCAACGCGCAGGGGACCATGGTCCCCGTGGCCGCGCTCGCGGACATCCGGGAGGTCACCGGGCCGCTCGTCCTGACGCGTTATAATATGTACCCGGCCGCACCGATCAACGGCTCGGCCGCGCCCGGGGTCAGCTCGGGCACCGGCATCACCCTGATGGAGAAGCTGTCGAAGACCGAACTGCTCAAGTCCATGACCTACGAATGGACCGAGCTGGCCTACCTCGAGCTCCAGGCGGGCAACACCGCCATGGTGATCTTCGGCTTCGCCGTGGTCATGGTGTTCCTCGTCCTCGCGGCCCAGTACGAGAGCTGGTCGCTCCCGCTCGCGATCATCCTCGTGGTGCCGATGTGCCTCCTGAGCGCGATCATCGGGGTGCGGTACGTCAAGGCCGACATCAACATCTTCACGCAAATCGGGTTCGTCGTGCTGGTGGGGCTCGCGAGCAAGAACGCAATCCTCATCGTCGAGTTCGCGAAGATGTTGAAGGACAAGGGGGAGACGCCTCGCCAGGCGGCCCTCGACGCCTGCCGGCTCCGCCTCCGGCCGATCATCATGACGTCGCTCGCGTTCATCCTGGGCGTGGTCCCGCTGATGTTGTCCACGGGCGCGGGGGCCGAGATGAGGCGCACGCTGGGGACGACGGTCTTCAGCGGCATGCTCGGCGTCACCCTCTTCGGGATCGTCCTCACGCCGGTGTTCTTCCTCGTCATCGAGGTCCTGGGCGAGTCGCACCTCTTCCACTGGCCGCTGCTCCGTCGGACGAGCAACGCCATCCTCTGGGTGCTCTCGTTCCGGTTCGTCCGACGAGTGGCCCGTCGGGCGAAGCCGGCCCTCGTGACCAAGCCCGCCCCGCTGGAAGCGGCCCCCGATCCGAACGGCTCCAAGCCCCACTTCGAGGAGTTGCCCTCCGCGAAGCCGGCGAAGCCCGTCTACTCCGACGGCACGTCGCACGTTGAGAACGGTGTGGGATCCCATGCCAACGGCAATGGCAATGGTCACGGGAACGGCCGCGCCCACTCCAACGGCCATGCCGCCACGAATGGCCACGCCGACTCCAACGGCAGCTCGGGGTACTCCAACGGCCATGGTCAGGCGAACGGCCAGTCGCCCCACGCGAACGGGGCGGCGAAGCCCGCGAACGGGACGACGACCGCGGAAAACGGCCCGGCCGGAGATCCCCGCGAGGTGCGCGCGGCCTCGAACGGGGCGGCCGCCCTCGGCAACGGCACCCCTCCCGACTCGAACGGCATTCCACCCTCCTCGAATGGTCCCGTGACGCCCACCCTCCCCCCGTCGGGCCACTGA
PROTEIN sequence
Length: 1263
LISRFFIDRPIFASVLSIVITLAGGIALFALPIALYPPVSPPTVQVDCTYPGASAQVVAETVAVPIEQQVNGVENMMYMSSQCTNDGAYNLTVTFKHGVNLNMAQVLVQNRVSLALPNLPDVLKQTGVTTRKKAPDILLAIAINSPGAKRDQLYLSNYALMHLKDELARIPGVSDINMMGQRDYSMRIWVDPDQLASRNMTASDVVAALRSQNMQIATGQIGQPPTPAGQKIQITLSTLGRLTDVEQFENVIVRATPEGKLVRIKDVARVELGAKNQDISGKVNGNPTVSLAVFQLPDANALDVAVLVKDKLKELAADFPDGVGYEIRYDTTPFIQESIDEVLKTLFEAVVLVAIVVLVFLQSWRSAIIPLVAVPVAIVGTLAVMAAMGFSLNNLTLFGLVLAIGIVVDDAIVVVEAVEHHIEHGMSPRDATIKAMDEVSGPVIAIGLVLTAVFVPCAFISGIVGQFFRQFALTIATSTIISAFNSLTAVAIGSTLVGLVAGWFVSRLLNWFLAGFFWLFNLGFRHATNAYTKLVAGMLRVSVLVCLGYGALLYLTYWDFNHTPKGFIPSQDMGYLLVNVQLPDSAAQERTMAVMERMEKIAHTIPGVKHTQATSGMSLLLSANGSNFGSMFVILDGFEHRRTPDLSSDSIAKKLREKFEKDVPEAMLTVLGPPPVRGVGRAGGFKFMVEDRGDNKPQTLQGQTENLVDRAKSMKVEASEESPWDSLVALFRKGPKKEDKPGGGQRPAFVGLTSVFRANVPSLYVDVNRRECMAKDVQLKDFFDTLRIYLGSLYVNDFNRFGRTWQVIVQADAKYRHRVEDAKRLKVRNAQGTMVPVAALADIREVTGPLVLTRYNMYPAAPINGSAAPGVSSGTGITLMEKLSKTELLKSMTYEWTELAYLELQAGNTAMVIFGFAVVMVFLVLAAQYESWSLPLAIILVVPMCLLSAIIGVRYVKADINIFTQIGFVVLVGLASKNAILIVEFAKMLKDKGETPRQAALDACRLRLRPIIMTSLAFILGVVPLMLSTGAGAEMRRTLGTTVFSGMLGVTLFGIVLTPVFFLVIEVLGESHLFHWPLLRRTSNAILWVLSFRFVRRVARRAKPALVTKPAPLEAAPDPNGSKPHFEELPSAKPAKPVYSDGTSHVENGVGSHANGNGNGHGNGRAHSNGHAATNGHADSNGSSGYSNGHGQANGQSPHANGAAKPANGTTTAENGPAGDPREVRAASNGAAALGNGTPPDSNGIPPSSNGPVTPTLPPSGH*