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berkeley_reactor_200306_planktonic_scaffold_111214_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 44046..45593

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL55_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 511.0
  • Bit_score: 860
  • Evalue 5.90e-247
cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 511.0
  • Bit_score: 860
  • Evalue 1.70e-247
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGA30129.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 511.0
  • Bit_score: 860
  • Evalue 8.20e-247

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1548
ATGTCGCGATTCTTCATCGACCGTCCGATCTTCGCCGCGGTGCTCTCCATCGTGATCACCCTGGCGGGGGGGATCGCCGTCTTCACGCTGCCGATCGCGCAATACCCGGAGATCACGCCCCCCACGGTGGAGGTCTCCGCGTATTATCCGGGCGCCAACGCGCAGGTGGTCGCCGACACCGTCGCCGCTCCCATCGAGCAGCAGGTCAACGGCGTCGAGAACATGATGTACATGTCGTCGCAGTGCACCAACGACGGCAATTACAAACTGACCATCACGTTCCGGCTCGGCGTCGACTTGAACATGGCCCAGGTCCTGGTCCAGAACCGGGAGTCGTTGGCCGAGCCGATCCTGCCCGACCTGGTCAAGCGCCGAGGGGTGACGGTCAAGAAGAAGTCGCCCAGCATCCTGATGATCGTGAACCTGTTCTCGCCCGACGACAGCCGCGACAACCTGTACTTGAGTAATTATGCCACGATTCAGCTCCGCGACGAGCTGGCCCGGCTCCCGGGCGTCGGCGACATCACCTATCTCGGCCAGCGCGATTACAGCATGCGGGTCTGGCTCGACCCCGGCAAGATGGCGTTCCGCGGCCTGACGTCGAGCGACGTCGTCCGGACCATCGAGCAGCAGAACGCGCAGGTCGCCGCGGGACAGATCGGGCAGCCGCCGGTGCCCACGGGGCAGGTCTTCCAGTACACGATGAGTACCCTGGGCCGCCTCATCGACGCGGACCAGTTCGCGGACATGATCCTCAAGACCGACAACCAGGGGCGAATCGTCCGACTGAGGGACGTCGCGCGCATCGAGCTCGGCGCCCAGGCTTACGACCAGACCTGTACCCTGGACGGTAAACCATCGGTCGCCCTCTCCATCTATCAACGTCCGGGCTCCAACGCGCTCGAGACCGCCGACCTCGTCGAGCGGAAGATGGAGGAGCTCAAGGCGCGGTTCCCGGAGGGCCTCGACTACTCGATCGTCTACGACACGACCCCGTTCATCCGGGAGTCGGTCAGCGAGGTCTTCAACACGCTCCGGGACGCGGTCATCCTCGTCGCCATCGTGGTCCTCGTCTTCCTCCAGAACTGGCGGGCGGCCATCATCCCGCTGATCGCGGTGCCGGTCGCGATCATCGGCACGTTCGCCGTGATGGCGGCGATGGGCTTCTCGCTCAACAACCTCTCGCTCTTCGGCCTGGTGCTGGCGATCGGGATCGTGGTCGACGACGCGATCGTCGTCGTCGAGGCGGTTGAGCATCATATCGAACATGGGATGTCTCCCAGAGACGCGACCGTCCAGGCGATGGACGAGGTCTCTGGGCCGGTGATCGCGATCGGGCTGGTGCTGACGGCGGTGTTCGTGCCTTGTGCGTTCATCAGCGGGATCGTCGGGCAGTTCTTCCGGCAGTTCGCGCTGACGATCGCGACGTCGACGATCATCTCGGCGTTCAACTCGCTGACGGACGATCATCTCGGCGTTCAACTCGCTGACGCTCAGCCCGGCGCTCTCGGCGCTCTTGCTCCGCCCCCGATCGCAAGGGGGCGGTGA
PROTEIN sequence
Length: 516
MSRFFIDRPIFAAVLSIVITLAGGIAVFTLPIAQYPEITPPTVEVSAYYPGANAQVVADTVAAPIEQQVNGVENMMYMSSQCTNDGNYKLTITFRLGVDLNMAQVLVQNRESLAEPILPDLVKRRGVTVKKKSPSILMIVNLFSPDDSRDNLYLSNYATIQLRDELARLPGVGDITYLGQRDYSMRVWLDPGKMAFRGLTSSDVVRTIEQQNAQVAAGQIGQPPVPTGQVFQYTMSTLGRLIDADQFADMILKTDNQGRIVRLRDVARIELGAQAYDQTCTLDGKPSVALSIYQRPGSNALETADLVERKMEELKARFPEGLDYSIVYDTTPFIRESVSEVFNTLRDAVILVAIVVLVFLQNWRAAIIPLIAVPVAIIGTFAVMAAMGFSLNNLSLFGLVLAIGIVVDDAIVVVEAVEHHIEHGMSPRDATVQAMDEVSGPVIAIGLVLTAVFVPCAFISGIVGQFFRQFALTIATSTIISAFNSLTDDHLGVQLADAQPGALGALAPPPIARGR*