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berkeley_reactor_200306_planktonic_scaffold_111214_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 45673..47448

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL55_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 585.0
  • Bit_score: 904
  • Evalue 4.10e-260
cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 585.0
  • Bit_score: 904
  • Evalue 1.10e-260
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGA30129.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 585.0
  • Bit_score: 904
  • Evalue 5.70e-260

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1776
ATGGGCCCCTCGGCCGGAGCGGCGCTCGGTCTCGGGCTGGACCCGTCGTTGTACCCGGCGCTCGCCGCGACACTCGTCGGCGCCCTCGGCGGCTGGATCATCGGCTGGCCGATCAACCGGCTCCTGATCGCGTTCTTCCGCCTGTTCAACTCGGGTTTCACGATCGCGACGAACGCCTATACCCGCGTCGTCGGGATGCTCCTGCGGGTCAGCCTGATGGTCCTGGTCGGGTACGGCGGGTTGCTCTACCTGACGTATTACGGCTTCGCCCACACGCCCACGGGCTTCATCCCCACTCAGGATAAGGGATACCTCCTCGTCAACGTCCAGATGCCCGACTCCACGTCGCTGGAGCAGACCCAGAAGGTCATGCAGCGGATCGAGGAAATCTCGAGGAAGGTCAAGGGGGTCAGCCACACGGTTGCGATCGCGGGCCAGTCGATCCTCCTGAATGCCAACGCGCCGAACTTCGGCGCGATGTACGTGATGCTCGAGGAGTTCCACCACCGGAACGCCCCGGGCCTCTCCGGCGACGAGATCGCCGCCAAGCTCAACGCCGCCTATCAGGAGCAGATCGAGGACGGCCTCATCAACATCTTCGGCGCACCGCCCGTCGACGGGCTCGGCACGGCCGGCGGCTTCAAGGCGATCGTCGAGGACCGCGGCGACTCCGGCGCGGAGGTGCTCCAGTCGGTCGCGGACCGCGTCGTGGCCAACGGGAACGACACGCGCGGCCTCCAGGGGCTCTTCACCAGCTTCCGGGCCAACACCCCCTGGCTCTTCCTCGACATCGACCGCACCAAGGTCGAGACCTCCGGCGTCTCCATGGGCGAGGTCTTCAACACGCTCCAGGTCTACCTCGGTTCGCTCTACGTCAACGACTTCAATCGCTTCGGCCGGACCTGGCAGGTCAACGTGCAGGGGGACTCGAACTTCCGGAAGCAGATCGAGGACCTCAAGCAACTGAAGATCCGCAACCGAGCCGGCGGGATGGTCCCGCTCGGGACGATGGCCAGCATCCGAGACCGGAGCGGGCCGGTGCTCCTGATGCGCTACAACATGTACCCCTCGGCCGCGATCAACGGCACGCCCGGGCCGGGCGTCAGCTCCGGCCAGGCGATCGGCCTGATGTCGGGGGTGACCAAGAACGAGCTCCCCAACTCGATGCGTTCCGAATGGACGGAGCTCGCGCTCCTTCAGCTCGAGACGGGGAACACCGCCATGCTCGTCTTCTTGCTCGCGGTCATCCTCGTGTTCCTGGTGCTCGCCGCGCAGTATGAGAGCTGGTCGTTGCCGTTCTCGGTGATCCTCGTGGTCCCGATGTGCTTGCTCTGCTCGATCGCGGGGGTGCTCTACGCGAAGATGGATATCAACATCTTCACGCAGGTCGGGTTCATCGTGCTCGTCGGCCTCGCGTGCAAGAACGCGATCCTCATCGTCGAGTTCGCGAAGGCACGCCGCGAGTCGGGCGTCCCCCGGCGACAGGCGACGCTCGAGGCGTGCCAGCTCCGGCTCCGGCCGATCATGATGACCTCGCTCGCGTTCATCCTCGGCGTCGTGCCGCTGGTGATCGCCGAGGGTGCCGGGGCCGAGATGAGGCGGACGCTGGGCACCGCCGTCTTCAGCGGCATGCTCGGCGTCACCCTCTTCGGGATCTTCCTGACCCCCGTTTTCTATAGCGTGATCCAGTGGTTCAACGACCGCCTCGGCAGCGGCGAGCCGACCGTCGAGCCCGAGTACGGCGACGAGCCGCCGCACGCCGCGCATGGCCACTGA
PROTEIN sequence
Length: 592
MGPSAGAALGLGLDPSLYPALAATLVGALGGWIIGWPINRLLIAFFRLFNSGFTIATNAYTRVVGMLLRVSLMVLVGYGGLLYLTYYGFAHTPTGFIPTQDKGYLLVNVQMPDSTSLEQTQKVMQRIEEISRKVKGVSHTVAIAGQSILLNANAPNFGAMYVMLEEFHHRNAPGLSGDEIAAKLNAAYQEQIEDGLINIFGAPPVDGLGTAGGFKAIVEDRGDSGAEVLQSVADRVVANGNDTRGLQGLFTSFRANTPWLFLDIDRTKVETSGVSMGEVFNTLQVYLGSLYVNDFNRFGRTWQVNVQGDSNFRKQIEDLKQLKIRNRAGGMVPLGTMASIRDRSGPVLLMRYNMYPSAAINGTPGPGVSSGQAIGLMSGVTKNELPNSMRSEWTELALLQLETGNTAMLVFLLAVILVFLVLAAQYESWSLPFSVILVVPMCLLCSIAGVLYAKMDINIFTQVGFIVLVGLACKNAILIVEFAKARRESGVPRRQATLEACQLRLRPIMMTSLAFILGVVPLVIAEGAGAEMRRTLGTAVFSGMLGVTLFGIFLTPVFYSVIQWFNDRLGSGEPTVEPEYGDEPPHAAHGH*