ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_113905_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(24047..24634)

Top 3 Functional Annotations

Value Algorithm Source
sugar isomerase n=1 Tax=Rudanella lutea RepID=UPI0003825F17 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 189.0
  • Bit_score: 258
  • Evalue 3.00e-66
Phosphoheptose isomerase {ECO:0000313|EMBL:AHM63000.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 185.0
  • Bit_score: 258
  • Evalue 4.10e-66
sugar isomerase similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 183.0
  • Bit_score: 253
  • Evalue 4.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flammeovirgaceae bacterium 311 → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGCAAAACCTTTCGAGTTGGTTGTCCGAATACCGTGCGCGACAGCAGGAGGTGTACGACGCCTTGCCGCTCGACCAGGTGGCCGAGGTGGTCGAGCTCTTCCGACGGGCGAAGGACAAGGGCGCCCAGATCTTCGTGTTCGGCAACGGCGGCAGCGCGGCCAACGCCTCGCACTTCGTCACCGACGTGGGCAAGGGGGCCTCGGACAAGTCGGACGTCCGGTTCCGCATCCTCTCGCTGAACGACAACACGGCGTGGATGACCGCGATCGGTAACGATTACTCATACGAAGATGTTTTTCTGCGACAGATCCAGAACTACGCCCGGCCGGGCGACCTGGCGCTCACGATGAGCGTCAGCGGCAACTCGCCGAACCTGGTCAAGGCGATCCGCTGGGCGCGTGAGAACGGCGTGACGACGGTGGCCCTGGTGGGGGCGAAGCGGGGGGCGCTGGCCGAGATCGCCGAGCACGTCCTGGTCATCCCCGACACGCACTACGGTCGCGTGGAAGACGCGCAGATGACCATCTGCCACATGCTCGCCTATGCCTTCATGGAGCAGCCGAAGGGCGCGGGAGCGTCGGCATGA
PROTEIN sequence
Length: 196
MQNLSSWLSEYRARQQEVYDALPLDQVAEVVELFRRAKDKGAQIFVFGNGGSAANASHFVTDVGKGASDKSDVRFRILSLNDNTAWMTAIGNDYSYEDVFLRQIQNYARPGDLALTMSVSGNSPNLVKAIRWARENGVTTVALVGAKRGALAEIAEHVLVIPDTHYGRVEDAQMTICHMLAYAFMEQPKGAGASA*