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berkeley_reactor_200306_planktonic_scaffold_113905

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_113905_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

812..2131
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D718CB
Oxidoreductase domain protein {ECO:0000313|EMBL:EDY19129.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
oxidoreductase domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_113905_2
unknown

Not on your lists

2531..3169
DNA (639bp) protein (213aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_113905_3
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3252..5507)
DNA (2256bp) protein (752aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen domain protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5SB03_9PLAN
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen domain protein {ECO:0000313|EMBL:EMI28676.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
thioredoxin related protein
berkeley_reactor_200306_planktonic_scaffold_113905_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5775..6128)
DNA (354bp) protein (118aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5E3_SINAD
CheY-like receiver domain/Fis-type HTH domain-containing response regulator
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein {ECO:0000313|EMBL:AGA24649.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_5
unknown

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6631..6846
DNA (216bp) protein (72aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_113905_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6756..7280)
DNA (525bp) protein (175aa)
Acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ89_SINAD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGA28746.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7428..7985
DNA (558bp) protein (186aa)
Maltose O-acetyltransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CG67_MYXFH
maltose O-acetyltransferase
Maltose O-acetyltransferase {ECO:0000313|EMBL:AEI67419.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
berkeley_reactor_200306_planktonic_scaffold_113905_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8237..9055
DNA (819bp) protein (273aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ24_SINAD
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9074..11422
DNA (2349bp) protein (783aa)
Molybdopterin-dependent oxidoreductase alpha subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHD6_SINAD
Molybdopterin-dependent oxidoreductase alpha subunit {ECO:0000313|EMBL:AGA28672.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
molybdopterin-dependent oxidoreductase subunit alpha
berkeley_reactor_200306_planktonic_scaffold_113905_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12302..13993
DNA (1692bp) protein (564aa)
Carbohydrate-selective porin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5J0_SINAD
carbohydrate-selective porin
Carbohydrate-selective porin {ECO:0000313|EMBL:AGA24522.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_11
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14227..14901)
DNA (675bp) protein (225aa)
Cytosine/adenosine deaminase n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P9B4_CYAGP
cytosine/adenosine deaminase
Cytosine/adenosine deaminase {ECO:0000313|EMBL:AFY29715.1}; TaxID=292564 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;"
berkeley_reactor_200306_planktonic_scaffold_113905_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15921..16745
DNA (825bp) protein (275aa)
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQU1_9CHLR
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFH85812.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
molybdopterin dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_113905_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

16911..19643
DNA (2733bp) protein (911aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQU2_9CHLR
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFH85813.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_113905_14
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19640..20590
DNA (951bp) protein (317aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIA77248.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
berkeley_reactor_200306_planktonic_scaffold_113905_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20724..21770)
DNA (1047bp) protein (349aa)
PfkB domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ47_9BACT
PfkB domain protein {ECO:0000313|EMBL:EDY20738.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
bifunctional sugar kinase/adenylyltransferase
berkeley_reactor_200306_planktonic_scaffold_113905_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21767..22873)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A521F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24966.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23196..24050)
DNA (855bp) protein (285aa)
haloacid dehalogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029A2EF4
phosphatase
Putative phosphatase {ECO:0000313|EMBL:AGA24965.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_18
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24047..24634)
DNA (588bp) protein (196aa)
sugar isomerase n=1 Tax=Rudanella lutea RepID=UPI0003825F17
Phosphoheptose isomerase {ECO:0000313|EMBL:AHM63000.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
sugar isomerase
berkeley_reactor_200306_planktonic_scaffold_113905_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25102..26412)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPR3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30810.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26747..28468
DNA (1722bp) protein (574aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR85_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31487.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_21
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28526..29215)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB48_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL58124.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
berkeley_reactor_200306_planktonic_scaffold_113905_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29594..31201)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNH2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30817.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31633..32487
DNA (855bp) protein (285aa)
Tetratricopeptide repeat protein n=2 Tax=Singulisphaera acidiphila RepID=L0DNA5_SINAD
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AGA30854.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_24
unknown

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comp(32696..33664)
DNA (969bp) protein (323aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_113905_trna_1
unknown

Not on your lists

35167..35237
DNA (71bp)
transferRNA Cys
berkeley_reactor_200306_planktonic_scaffold_113905_25
unknown

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35659..36015
DNA (357bp) protein (119aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_113905_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

36358..42750
DNA (6393bp) protein (2131aa)
Excinuclease ABC, A subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN94_SINAD
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
excinuclease ABC subunit A
berkeley_reactor_200306_planktonic_scaffold_113905_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

44261..44791
DNA (531bp) protein (177aa)
N utilization substance protein B homolog n=2 Tax=Singulisphaera acidiphila RepID=L0DPS2_SINAD
transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

44852..45280
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNK3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30842.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_113905_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

45414..46178
DNA (765bp) protein (255aa)
Putative metal-dependent phosphoesterase, PHP family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR05_SINAD
metal-dependent phosphoesterase, PHP family
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:AGA30841.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying items 1-30 of 39 in total

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