ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_244760_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(18065..21835)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0D7D4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 980.0
  • Bit_score: 729
  • Evalue 5.00e-207
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 980.0
  • Bit_score: 729
  • Evalue 1.40e-207
Uncharacterized protein {ECO:0000313|EMBL:AGA24775.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 980.0
  • Bit_score: 729
  • Evalue 7.00e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 3771
GTGTTCAAGAAACTGCTCCAGGTCGTGACGGCATTCAGCCTCCTCATGGCGGGGTATGTCGGCTACGTCCGGGGCTTCGCGATCGTGGCCGTGCACCTCGCGCCGAAGGAGCGTCCGAAACTCACCCGGTGGACCCGAGAGCGGCCGAAGACCGAGCGCGATGCGATCGACCTCGCGATCAAGGCGTTCGGCAAGGATCACTGGAGCGCCGACAAGGACCTGCCGTTCCGCTACTACAACTTCGACCGCGGCTACTGGATCTACGCCAAGACCTGCGAGAAGAGCAAGGACGCCAAGCAGTTGACCATGAAGCCGTTCGCCCTCATCTGGGGGTCGCGCGGCAAGCCCGACGAGCTCAAGGTCGTGACCAGCGACGAGGCGGTGATCGACCTCGATCGCCCCCTCGGCCTGGTGTCCAGCAAGCAAGGGTCGTTGCGAGTGGTCCACGCCAGGATCCAGGGGAACGTCCGGATCCGCGACAACAAGGGCACCCTGAAGAATACCGCCGACGACCTCGTCATGGGCCCCATGCCCTACCTCGAGTACGACGAGGCCACCCTTCAGGTCAAGAGCGAGTCCGACGTCGTGATCAAGGATCGCGACATGAAGATCACGGGATTCGGCCTCCAGATCGACCTCCGCCCCAAGAACGAGGCCGGCATCCCCGGCGGGCCTTCGGGCTTCGACGGGGCGAAGACCGCGATCCTGAAAAAGAATGTCCACCTGATCATCAACAACGCCGGCTCGGCCGGGTCCCTCACGGGTTCGGGCAAGGCGAAGGCCACGACCAAGGGCGAGAAGTCGAACGGCCCGCTCGACGTGCGCTGCGCCGGCCCGATGCAGGTCGACTTGCCCAAGCCCAAGGACCCCGTCAAGGTCGGCCCGCCGGCCCCGGCCTCGCCGACGATGGTCTATTTCTCGCGCGACGTGGTCGTCCTCCAAATCAAGCCGGCCCAGCTCCCCGACCAGTTGAACTGCGACAACCTCCGGCTCACCCTCGTCCCGGCGCCCAAGCTCCCCGCTCCCGCCTCAGCCGCGGGCAAGGACGGCGCGTCCGGGCCGAAGCCCGCCCAGGCCAAGGTGGAGGTCAAGGAGCAGGCCAAGCCCCAGGAGGGCGAGGCCCTGGCGGACGCCGATCAAGAACCTTCGGCCGAAGGGGGCCCGGGCTCCGAGCTGACGCTCCGCGAGGCCATGGCCACGGGGCACGCCGTCTGGCTCCAGTCGAAGTCCCAGGGCCTGACGGTGCGCGGGAACGAGCTGATCCACTCCAAGCTCCTCTCGCGCGGCGAGTCCGACAAGACGTTCATCCGGAGCGACCCGACCTCGCAACTCTGGATCGAGAAGATCGACAAGTATCAAGACGGCCCCAAGAAGGGGGAGGTCCAGGCGGTCAACGTCATCAGGGCACCCGACGCGACGATCTTCGACGACGGGAAGGGGACGGAGTACGCACTCGTCGTCACGCGAGGCCCCGGCATCCTGGAGACTCGCCCGGGCCGCGACCAGCCGGTCGAGCGCAGGGCGACCTGGAACGACTCATTGGTGATGGAGACGAACGAGGGGCCGAGGAATCTGCCCCAGCGTGTCATCACGCTGAAAGGCCGCCCCAAGCTCTTCGATCTCAAGCAGGAGACGACCCTCGACGCCCGAGGCACGATCGTCGCCTTCCTCAAGCCGAAAGAGGCGAAGGCCGACCCCGCCAAGCCGACGTCCACCAAGGCGGCGACGGGTGCCGAGGCACCGACCGCGGGGCCGGGGGGGTTCCAGATCGACAAGCTCATCGCCTTGCAGGACGTCAACCTGAAGTCGCCCGGCAAGGTCATGTATGGGCGTGACCGGCTCGACGTGGACTTCCTGGCCGCGCCCCCCCTCGTGACGTCCCAGTCCCCGGCCCAACCGGCGGCCAACGCGCCGGCCGCCTCCGCCACCGCCTCGGCGAAGCCGGCGAACACCGTCGCGGGCACGAACGCGGCCCCCAACGGTTCTTCGGGACCGAAAGCCGCCGCCAAGACGCCGGAGAAGCCCAAGGACCCCGATATCCGCGTCCGTGCGAACCGCGTCTGGGCGTTGATCGCGCAGCGGCCGGCGAACGGGGCCTCCCCGCCCAAGGGCGACGGGACGGCCGGGCCGGGCGGGGCCGACGTCAAGGAAGTCCGGCTCCGTGGCGGGGTCGACTTCCATCAAGATCCCGCCCCCGGGAAGACCCAGGGGACCGACGTCGTCGGCGAGGCCCTCGACCTGGTCAACCTCGGCAACGGCAAGTCCAAGTTCCAGGTCCACGACCGCGAAGATTCCGCGTCCCCCTATCCCAACGAGCTGGCTGCGGCGATCCCCCCGGCGAAGGTCACGACCGAGGATATGACGATCGTCGGCCCGAGGATCAGCCTCGACCAGTCGACGGACTACGCCACCGTCATCGGGCCGGGCTCGCTGCTCCAGATGGCCGAGCGTGGCCTCTTCACCGACAAGGGACTCGGAGAAGAGAAGCCCGCCCCCAAGGACCCGAAGGCTCCTTCGACCAAGCGGCCTCTCAAGATCACCTGGAAGAAGGAGATGCGGTTCTACGGCCACTCGGTCAACCCGAACAAGGAAGCCGTCGCGAAGGCCGAGTTCTACGAGGACGTCCGCGCGACCATGGAGGACGCCTACCTCGAGTGCGAGGAGAAGATGGAGGCCTTCATGGACCGGACCGTCGTGCTCGCCCGACCCAAGCGCGACGACAAGGCCAAGGCCGAAGGCGTTGGCGAGCCACCCGCCGAGCCGAAGCCGCAGATCGCCTTGATCCGGTGCGACAAGAAGGTGCTGGTCGTCACGCGGAAGGTCGACCCGACCAACCCTCGCTTGCTCTTGCAGCAGCAGCAAATCGAGGGGGAGAAGCTCGCTTATGAGAAGGCGTCAGGCGACTTTATCGTCGAGAGCGCGGGCCGGGTCCATCTCTGGAACCGCGAGGGTGAGGACGAAATGGGCACCCAACCGGCCGCCGGCGCGCCTGGGGTGGCCCGAAGGACGGTGACTCCGACCTCGAACGTGGCCCCGAGCCCTCGAGGAGCGGGCGGGGCGAGGCCACCGCAGGTGGTCGGCCGGGCCGGGAATCCGAACCAAGGACCGAAGGCCGCCCGTCCCGGCGCGAAGGCCAAGGCCCTGGCTCCGCTGAAGCTCACCGTCATCGAGTTCAGCAAGTCGATGAAGGGCCGATACATCGCGGGCAAGGACGCCGACAAGGTCGAGCCGCGCTGGGCCGACTTCGAAGGCGACGTCCGGACGCTCCACGCCGAGGTCGCCGACGAGAAGGTCCGGCTCGACTTCGACCGGCCCCCCGAAGGCTACATGTTCCTGACATCCGACACGTTGCGGGTCATCAGCGAGCCGACCCTGGATCCCGCCAGCCCCACGCGCAACTTCCTCAAGGCCCGCGAGAACGCCCAGGCCAGGACCAGCACCGAGACCATCCAGGGTGACGTGATCACCTACGACTCCCTTAAACAGCTCTTCTACGCTTATAGCGACGAAGGCCGAGACGTCGTCGTGGTCCACGCCCCCGGGCCGGGCCAACCCCCGTCGAACACGAACGCCCGGGCCGTCCAGGTCAACCGCAAGACGGGCGAGTCGCAGCTCATCGACCCCGAGAAGTTCCAGCTCGTGGACGACAAGACCGGCTCCCGCCCCGGCCTCGTGAAAGAAGGCGCTCTCAAGCCGTACAAGCCGCAACGGGCCCCGCTCCGCCTCCCCGGCCGCAGCGTCACCGAGCGTCGCGGCATGAACGGGCGGTAG
PROTEIN sequence
Length: 1257
VFKKLLQVVTAFSLLMAGYVGYVRGFAIVAVHLAPKERPKLTRWTRERPKTERDAIDLAIKAFGKDHWSADKDLPFRYYNFDRGYWIYAKTCEKSKDAKQLTMKPFALIWGSRGKPDELKVVTSDEAVIDLDRPLGLVSSKQGSLRVVHARIQGNVRIRDNKGTLKNTADDLVMGPMPYLEYDEATLQVKSESDVVIKDRDMKITGFGLQIDLRPKNEAGIPGGPSGFDGAKTAILKKNVHLIINNAGSAGSLTGSGKAKATTKGEKSNGPLDVRCAGPMQVDLPKPKDPVKVGPPAPASPTMVYFSRDVVVLQIKPAQLPDQLNCDNLRLTLVPAPKLPAPASAAGKDGASGPKPAQAKVEVKEQAKPQEGEALADADQEPSAEGGPGSELTLREAMATGHAVWLQSKSQGLTVRGNELIHSKLLSRGESDKTFIRSDPTSQLWIEKIDKYQDGPKKGEVQAVNVIRAPDATIFDDGKGTEYALVVTRGPGILETRPGRDQPVERRATWNDSLVMETNEGPRNLPQRVITLKGRPKLFDLKQETTLDARGTIVAFLKPKEAKADPAKPTSTKAATGAEAPTAGPGGFQIDKLIALQDVNLKSPGKVMYGRDRLDVDFLAAPPLVTSQSPAQPAANAPAASATASAKPANTVAGTNAAPNGSSGPKAAAKTPEKPKDPDIRVRANRVWALIAQRPANGASPPKGDGTAGPGGADVKEVRLRGGVDFHQDPAPGKTQGTDVVGEALDLVNLGNGKSKFQVHDREDSASPYPNELAAAIPPAKVTTEDMTIVGPRISLDQSTDYATVIGPGSLLQMAERGLFTDKGLGEEKPAPKDPKAPSTKRPLKITWKKEMRFYGHSVNPNKEAVAKAEFYEDVRATMEDAYLECEEKMEAFMDRTVVLARPKRDDKAKAEGVGEPPAEPKPQIALIRCDKKVLVVTRKVDPTNPRLLLQQQQIEGEKLAYEKASGDFIVESAGRVHLWNREGEDEMGTQPAAGAPGVARRTVTPTSNVAPSPRGAGGARPPQVVGRAGNPNQGPKAARPGAKAKALAPLKLTVIEFSKSMKGRYIAGKDADKVEPRWADFEGDVRTLHAEVADEKVRLDFDRPPEGYMFLTSDTLRVISEPTLDPASPTRNFLKARENAQARTSTETIQGDVITYDSLKQLFYAYSDEGRDVVVVHAPGPGQPPSNTNARAVQVNRKTGESQLIDPEKFQLVDDKTGSRPGLVKEGALKPYKPQRAPLRLPGRSVTERRGMNGR*