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berkeley_reactor_200306_planktonic_scaffold_256481_6

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6655..7212)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPK3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 5.50e-54
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 1.60e-54
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 7.70e-54

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGCTCAACGAAGTCGAACTCAGGGCCGTGATCGACGCCGTCCTTCGAGGGCAGCACGACGCGTTCCTGAAGATCATGCGCGAGTTCGGGCTCCCGGTCCGGTCTTACGTCGCGAGCCACGTCTTCCACATGGACGACGTCGACGACGTGACGCAGGACGTCTTCTTCGTCGCGTTCCGGAATCTCCGCGACTATCGACAAGGGGACGACTTCGGAGCCTGGCTGCGTGGGATCGCGAGGAAGAAAGTCGCCGAGCACTACCGGAAATCGTCGAGGCGGCACAGGGCGATGTCCCGGTTCCGCGAGGAGGTCGTCCGCGTGCTGGAGGTCGACCTCGAGGGGATGGTCTCCGCCGACCGCGCGGAGTCGATCGAGGTCTTGTTGCGTTGCATCGGCCAACTGCCCGAGCGGTTGCGCAAGGTCGTCCGCGCCGGGCTGGACGGCGACAAGCCGGCCGACCTCGCCGGGAGGCTCGAGACGACCGTGGGGGCGATCTATCGCCTGCACTACCGCGCCAACCAGCTGCTCCGCGGCTGCATGCAGAAAGAGCTGGGATGA
PROTEIN sequence
Length: 186
MLNEVELRAVIDAVLRGQHDAFLKIMREFGLPVRSYVASHVFHMDDVDDVTQDVFFVAFRNLRDYRQGDDFGAWLRGIARKKVAEHYRKSSRRHRAMSRFREEVVRVLEVDLEGMVSADRAESIEVLLRCIGQLPERLRKVVRAGLDGDKPADLAGRLETTVGAIYRLHYRANQLLRGCMQKELG*