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berkeley_reactor_200306_planktonic_scaffold_256481_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 32231..33175

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYR0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 311.0
  • Bit_score: 172
  • Evalue 4.50e-40
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 363.0
  • Bit_score: 122
  • Evalue 1.20e-25
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 290.0
  • Bit_score: 211
  • Evalue 9.40e-52

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Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTCGCCGACGATGATCGTGGGGCGGGTCATCCTGCCCGTGATCGGCCTGACCCTGGCGGGACTTCTGGTCCGCCAGGTCGTCGCCACCGGCTCGGTCGGGCTCCCCGTCACCTCCGCCTCGGACGCCGACGCGAGCCCTTCCCGGCGGCCTGCCACCGGGTCGAAGACCGCCACCGCGGGTGCGGCGTCGAAGGTGGTCGCGGAAGGGCGCGTCGTGGCCTACCCGGGGGCCGAGGTCGTGGTGGGGGCCGAGGTGGCGGGGCAGATCCTCGCGATGCCCGTCGGCGAGACCTCGGCCGTGCGCAAGGGGGCCCTCCTCGCGGAGTTCCGGTCGGACGACGCCGAGGCCGCGGCCCGCGAGGCCCAGGCGAGGCTCGCGGAAGCCGAGGCCGCGCTCGCCCAGTCGACCGTCGAGAGCCAGAGGCGCCAGGCGTTCCAGTCTCGCCTCGCCGGGACGGTGCTGGAGCGGGATCGCGTGGACCACGAACTGGGGATCGCCCGGGCTCGCCGCGACGCCGCCAAGGCCGCCGCCGATCACGCCGAGGTCCTGAAGGGCCGGTGCCGCGTCCTCGCCCCGATCGACGGCGTCGTCGTCGCTCGCCACGCGAATGCGGGCGAGACCGTGAACCTCGGCTCGCCCCTGGTCACGATCGTCGACCTGAGTCGCCTGCGGGTCGAGGCCGAGGTCGACGAGTCCGACATCGCCCGTTGCCCCCTCGGGGCGAAGGCCACCCTCTCCGCCGAGGCGTTCCCCGGCCAGTCGTGGAAGGCCGAGGTCGAGGAGATCCCGGTCGCCCTCACCGGCCGCGAGATCCGCCCCGAAGACCCGAGCCGGCCCACCGACCTGGGCGTCCTCCGCGCCAAAGTGGCCCCCCGCGAAGCGAACCCGCTGAAGCTGGGGCAGAGGGTCGACGTCGAGATCTTCGCCGGGGGCGACCACTGA
PROTEIN sequence
Length: 315
MSPTMIVGRVILPVIGLTLAGLLVRQVVATGSVGLPVTSASDADASPSRRPATGSKTATAGAASKVVAEGRVVAYPGAEVVVGAEVAGQILAMPVGETSAVRKGALLAEFRSDDAEAAAREAQARLAEAEAALAQSTVESQRRQAFQSRLAGTVLERDRVDHELGIARARRDAAKAAADHAEVLKGRCRVLAPIDGVVVARHANAGETVNLGSPLVTIVDLSRLRVEAEVDESDIARCPLGAKATLSAEAFPGQSWKAEVEEIPVALTGREIRPEDPSRPTDLGVLRAKVAPREANPLKLGQRVDVEIFAGGDH*