ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_267469_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(24428..25186)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthesis pathway, component FliR n=2 Tax=Singulisphaera acidiphila RepID=L0DR08_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 252.0
  • Bit_score: 335
  • Evalue 3.20e-89
flagellar biosynthesis pathway protein FliR similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 252.0
  • Bit_score: 335
  • Evalue 9.10e-90
Flagellar biosynthesis pathway, component FliR {ECO:0000313|EMBL:AGA31453.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 252.0
  • Bit_score: 335
  • Evalue 4.50e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 759
ATGACGCCGAGCGAGCTGGCCTGGTTGCTCGGGCAAGCCGGGACGGGGGCCCTGGTGCTCTCGAGGGTCTTCGGGCTGACCTGGACCGCCCCGGGCCTGGCGGTCCCCGGCGCGGATTGGCGGTCCCGCCTGGCCCTGGCCTTGGTCCTCGGGGTGATCCTGGTCCCGGCGGTCTCGGCGCAGGTCGCCGTCCCGATCGGCCTGGACGCTTTGGGCAAGGCGTGTCTGGTCGAGGCGGTGGTCGGGGCGGCGCTCGGGTGGTCGGCGGCCCTGATCGTGGCCGGGGCGAGGCAGGCCGGCGAGATCGTCGGGGCCCAGGCCGGGCTCTCGGCCGCCTCCCTCTTCGACCCCGACGCCGGCGAGGAAATGACGGCCCTCGGGCACTGGTACGGCCTCGTGGCCCTGGCGATCTTCCTCGCCCTCGACGGCCCGCTCGTGCTCGTCCAGGCGCTCGTCGAGAGCTATCGAGTGGCGCCGGTCGGAGGGGTGACCCTGTCGGAGGAGTCGGCGACCTTGGCGTTCGCCCGCGTCGGCCAGGCCCTGGAATTGGCGCTCCGCGCCGCCGCGCCGCCGGCCCTGGCCTTGGCCCTGGCGGGGGTCGCGCTCGGGCTGCTCGGGAAGGCCGCGCCTTCGCTGCCGCTCGTGACCTTGTCGATGCCCGTCCGGTCGGTGATCGGCCTGATCGTGGTCGGCCTCGGGATGGCGACCCTGGCCGTCACGATCGCGGGGGCCTGGACGTCCTGGCCGGGGGGAGGCTGA
PROTEIN sequence
Length: 253
MTPSELAWLLGQAGTGALVLSRVFGLTWTAPGLAVPGADWRSRLALALVLGVILVPAVSAQVAVPIGLDALGKACLVEAVVGAALGWSAALIVAGARQAGEIVGAQAGLSAASLFDPDAGEEMTALGHWYGLVALAIFLALDGPLVLVQALVESYRVAPVGGVTLSEESATLAFARVGQALELALRAAAPPALALALAGVALGLLGKAAPSLPLVTLSMPVRSVIGLIVVGLGMATLAVTIAGAWTSWPGGG*