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berkeley_reactor_200306_planktonic_scaffold_267469

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_267469_1
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

765..1526
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TR14_BACCJ
hypothetical protein
Tax=BJP_IG2158_Thermincola_46_17
berkeley_reactor_200306_planktonic_scaffold_267469_2
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1615..1923
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U1T8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI55224.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
GTPase subunit of restriction endonuclease-like protein
berkeley_reactor_200306_planktonic_scaffold_267469_3
unknown

Not on your lists

2199..2420
DNA (222bp) protein (74aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_4
unknown

Not on your lists

comp(2386..2616)
DNA (231bp) protein (77aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3143..3919)
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSV7_SINAD
FliA/WhiG family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_6
unknown

Not on your lists

3959..4411
DNA (453bp) protein (151aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4225..5187)
DNA (963bp) protein (321aa)
Site-determining protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR51_SINAD
chromosome partitioning ATPase
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_8
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5474..5845)
DNA (372bp) protein (124aa)
S23 ribosomal protein n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V0V8_9CYAN
S23 ribosomal protein
Tax=RBG_13_Planctomycetes_46_10_curated
berkeley_reactor_200306_planktonic_scaffold_267469_9
unknown

Not on your lists

5959..6636
DNA (678bp) protein (226aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(6540..7694)
DNA (1155bp) protein (385aa)
Flagellar GTP-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DR02_SINAD
flagellar GTP-binding protein
Flagellar GTP-binding protein {ECO:0000313|EMBL:AGA31448.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7862..9994)
DNA (2133bp) protein (711aa)
Flagellar biosynthesis pathway, component FlhA n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ00_SINAD
flagellar biosynthesis pathway, component FlhA
Flagellar biosynthesis pathway, component FlhA {ECO:0000313|EMBL:AGA31449.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_12
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11561..15289
DNA (3729bp) protein (1243aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IG95_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KJS57303.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
NLP/P60 protein
berkeley_reactor_200306_planktonic_scaffold_267469_13
unknown

Not on your lists

comp(15186..15539)
DNA (354bp) protein (118aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15731..15889)
DNA (159bp) protein (53aa)
Flagellar biosynthesis pathway, component FlhB n=2 Tax=Singulisphaera acidiphila RepID=L0DR54_SINAD
flagellar biosynthesis pathway, component FlhB
Flagellar biosynthesis pathway, component FlhB {ECO:0000313|EMBL:AGA31452.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_15
unknown

Not on your lists

16084..16479
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51A6
berkeley_reactor_200306_planktonic_scaffold_267469_16
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16577..17953
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYI0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18139.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
berkeley_reactor_200306_planktonic_scaffold_267469_17
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18194..19939
DNA (1746bp) protein (582aa)
Phosphodiesterase/alkaline phosphatase D n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QWJ6_NOSS7
phosphodiesterase/alkaline phosphatase D
Phosphodiesterase/alkaline phosphatase D {ECO:0000313|EMBL:AFY49531.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
berkeley_reactor_200306_planktonic_scaffold_267469_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19876..20640)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5X8_SINAD
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGA24814.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21174..22490
DNA (1317bp) protein (439aa)
Putative dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQP3_SINAD
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA31293.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_20
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22736..23089
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C512B
Tax=RBG_13_Planctomycetes_63_9_curated
berkeley_reactor_200306_planktonic_scaffold_267469_21
unknown

Not on your lists

23099..23227
DNA (129bp) protein (43aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23389..24423)
DNA (1035bp) protein (345aa)
Flagellar biosynthesis pathway, component FlhB n=2 Tax=Singulisphaera acidiphila RepID=L0DR54_SINAD
flagellar biosynthesis pathway, component FlhB
Flagellar biosynthesis pathway, component FlhB {ECO:0000313|EMBL:AGA31452.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24428..25186)
DNA (759bp) protein (253aa)
Flagellar biosynthesis pathway, component FliR n=2 Tax=Singulisphaera acidiphila RepID=L0DR08_SINAD
flagellar biosynthesis pathway protein FliR
Flagellar biosynthesis pathway, component FliR {ECO:0000313|EMBL:AGA31453.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25287..25553)
DNA (267bp) protein (89aa)
Flagellar biosynthesis pathway, component FliQ n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ05_SINAD
flagellar biosynthesis pathway protein FliQ
Flagellar biosynthesis pathway, component FliQ {ECO:0000313|EMBL:AGA31454.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25814..26803)
DNA (990bp) protein (330aa)
Flagellar biosynthesis pathway, component FliP n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR26_SINAD
flagellar biosynthesis pathway protein FliP
Flagellar biosynthesis pathway, component FliP {ECO:0000313|EMBL:AGA31455.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26800..27342)
DNA (543bp) protein (181aa)
Flagellar biogenesis protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSW8_SINAD
flagellar biogenesis protein
Flagellar biogenesis protein {ECO:0000313|EMBL:AGA31456.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_27
unknown

Not on your lists

comp(27535..27843)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI00024709C9
flagellar motor switch protein FliG
berkeley_reactor_200306_planktonic_scaffold_267469_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27836..28405)
DNA (570bp) protein (190aa)
Flagellar motor switch protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR58_SINAD
flagellar motor switch protein
Flagellar motor switch protein {ECO:0000313|EMBL:AGA31457.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28402..29886)
DNA (1485bp) protein (495aa)
Flagellar biosynthesis/type III secretory pathway lipoprotein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR14_SINAD
flagellar biosynthesis/type III secretory pathway lipoprotein
Flagellar biosynthesis/type III secretory pathway lipoprotein {ECO:0000313|EMBL:AGA31458.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_30
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(30369..30992)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR31_SINAD
Uncharacterized protein {ECO:0000313|EMBL:AGA31460.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy