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berkeley_reactor_200306_planktonic_scaffold_267469

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_267469_31
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31618..33417)
DNA (1800bp) protein (600aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=2 Tax=Singulisphaera acidiphila RepID=L0DSX3_SINAD
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGA31461.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_32
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33886..35799)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031F37CC
hybrid histidine kinase
Candidate histidine kinase, hybrid {ECO:0000313|EMBL:AEG92422.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
berkeley_reactor_200306_planktonic_scaffold_267469_33
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(35804..37306)
DNA (1503bp) protein (501aa)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:EEF59965.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EEF59965.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
circadian clock protein KaiC (EC:2.7.11.1)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036B01DB
berkeley_reactor_200306_planktonic_scaffold_267469_34
unknown

Not on your lists

37555..38172
DNA (618bp) protein (206aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_35
unknown

Not on your lists

comp(38253..39026)
DNA (774bp) protein (258aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_36
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(39320..40156)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034641FE
rRNA methylase {ECO:0000313|EMBL:KIE13597.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
RNA methyltransferase
berkeley_reactor_200306_planktonic_scaffold_267469_37
unknown

Not on your lists

comp(40650..41033)
DNA (384bp) protein (128aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_38
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

41544..42941
DNA (1398bp) protein (466aa)
Cytochrome c Hsc n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T7F7_9DELT
cccA; cytochrome c catalase, 2 heme-binding sites
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
berkeley_reactor_200306_planktonic_scaffold_267469_39
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43057..43914
DNA (858bp) protein (286aa)
Acetyltransferase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EKD1_9GAMM
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEK11716.1}; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
berkeley_reactor_200306_planktonic_scaffold_267469_40
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(44097..45800)
DNA (1704bp) protein (568aa)
Penicillin-binding protein, beta-lactamase class C n=2 Tax=Singulisphaera acidiphila RepID=L0DH09_SINAD
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGA28547.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_41
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(45881..47374)
DNA (1494bp) protein (498aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQP0_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31288.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_42
unknown

Not on your lists

47800..48210
DNA (411bp) protein (137aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_43
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(48438..49382)
DNA (945bp) protein (315aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2P7_PIRSD
ADP-ribosylation/Crystallin J1
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
berkeley_reactor_200306_planktonic_scaffold_267469_44
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

49633..50193
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBJ6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26749.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_45
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(50334..51527)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0D5D1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24639.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_46
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51700..53094)
DNA (1395bp) protein (465aa)
pectate lyase n=1 Tax=Schlesneria paludicola RepID=UPI00029A3AF3
Pectate lyase {ECO:0000313|EMBL:EPR66264.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
pectate lyase
berkeley_reactor_200306_planktonic_scaffold_267469_47
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

53333..54967
DNA (1635bp) protein (545aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Singulisphaera acidiphila RepID=L0D7N8_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA24666.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_48
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(55216..56454)
DNA (1239bp) protein (413aa)
Thioredoxin n=1 Tax=Rhodopirellula baltica SH28 RepID=K5EEQ4_RHOBT
Thioredoxin {ECO:0000313|EMBL:EKK04356.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
peroxiredoxin
berkeley_reactor_200306_planktonic_scaffold_267469_49
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(56988..58706)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGS5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28013.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_50
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

58960..61656
DNA (2697bp) protein (899aa)
Peroxiredoxin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH08_SINAD
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGA28103.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_51
unknown

Not on your lists

61983..62141
DNA (159bp) protein (53aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_267469_52
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(62261..63229)
DNA (969bp) protein (323aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Porphobilinogen deaminase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFH6_SINAD
porphobilinogen deaminase
berkeley_reactor_200306_planktonic_scaffold_267469_53
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(63237..64001)
DNA (765bp) protein (255aa)
Putative amidophosphoribosyltransferase n=2 Tax=Singulisphaera acidiphila RepID=L0DH68_SINAD
amidophosphoribosyltransferase
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:AGA28011.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_54
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(63998..64630)
DNA (633bp) protein (211aa)
RNA polymerase sigma factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGN5_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_267469_55
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(64778..65848)
DNA (1071bp) protein (357aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Singulisphaera acidiphila RepID=L0DF53_SINAD
2-vinyl bacteriochlorophyllide hydratase
berkeley_reactor_200306_planktonic_scaffold_267469_56
unknown

Not on your lists

66104..66187
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying items 31-56 of 56 in total

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