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berkeley_reactor_200306_planktonic_scaffold_267469_46

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(51700..53094)

Top 3 Functional Annotations

Value Algorithm Source
pectate lyase n=1 Tax=Schlesneria paludicola RepID=UPI00029A3AF3 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 448.0
  • Bit_score: 615
  • Evalue 3.90e-173
Pectate lyase {ECO:0000313|EMBL:EPR66264.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 434.0
  • Bit_score: 468
  • Evalue 6.30e-129
pectate lyase similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 462.0
  • Bit_score: 343
  • Evalue 6.10e-92

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Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAACGGGATCTGTCGACGGCCGGTTCGGGCGGGATTCGTGTGGGCGTGCTTGGCCTTGTTCCTCGCCGCGACGGCTCAGGCCGGGGCGGAGGAGGGCCTGGTCGCGTTCCCCGGGGCGGAGGGCTTCGGGAGGCTCGCGAAGGGGGGGCGTGGGGGGGACGTGTACCACGTCACGACGCTCGACGACTCGGGGCCGGGGTCGTTGCGGGAGGGGATCCGGTCCGCCTCGGGGCCCCGGACGATCGTGTTCGACCTCTCGGGGACGATCGAGCTCAAGACGCCGCTGAAGGTCGACCGCTCGTTCCTGACGATCGCCGGGCAGTCGGCGCCCGGGGACGGGATCTGCCTCAAGGACCAGACCTTCGTGCTCGACAAGGTCAAGCATGTGGTCGTCCGATACGTGCGGATGCGTTTGGGCGACCGGAACAAGCCGAAGCCTTCGGGGCCGGACGGGATCACGACGAACGACGTCGACCACGTCATCTTCGACCACATCTCGGCGACCTGGGGCATCGACGGCATCCACGACCTGCGCCGAGGGGGGAACTTCACGCTCCAGTGGTCGATCTACGCCGAGGCGCTCGACCAGAGCCTGCACGAGAAGGGGGGGCATGCGATGCTCTCGTCGTACCGGGACCTGACGGGGGGCGTCTCGATCCACCACAACCTGCTCGCCAGCAGCCGGGAGCGGCACCCGACCCTCGGGGGGAGCCCGAAGACCGACCCCAGGGCCATCGCCGACTTCCGCAACAACGTCGTCTACAACCCGAGCGGGGCGACGAACCTGGGCAACTGCCGGATCAACGTCGTCGCGAACGACTATCGGCCCGGCCCCAACGCGACGTCCCGCAAGCCGATCGCGGTGAAGGCCGAGAACCGAGGCGCGACGAAAGTCTTCCTCGCCGGGAACGTCTTCGAGGGGAATCCCGGCGACACCGCGGACAACTTCCTGGCCGTTGATGTCGACCAATGGTCGAAGGGGAACTACCTCCACTTGAGCGTGGCGGAGATCCGCGCCGAGGCCGAGTTCGACTGCGGCAGGGCCCGGCCCAGGACGCAGCCGGCGGAGGAGGCGTACGAGCTCGTCCTCCGGAACGCCGGCGCCTCGCGTCGCCGGGACTCGGCCGACGCCCGACTGGTCCGGGGGGTCCGCGACCGGACGCACCGGATGATCAACTCTCAGGACGAGGTCGGCGGCTGGCCCCCCCTCGAGACCTTGCCCGCTCCCCCCGACTCCGACCGCGACGGGATGCCCGACGCCTGGGAGCGGGCCCGACAGCTCAACCCCGAAGACCCGGCCGATCGCAACGGCGACCGGGATGGCGACGGATACACTAACCTCGAAGAGTACCTCAACGGCCTTTGCCCCACGCCGGTTGGCGGCGGGGCCTGA
PROTEIN sequence
Length: 465
MNGICRRPVRAGFVWACLALFLAATAQAGAEEGLVAFPGAEGFGRLAKGGRGGDVYHVTTLDDSGPGSLREGIRSASGPRTIVFDLSGTIELKTPLKVDRSFLTIAGQSAPGDGICLKDQTFVLDKVKHVVVRYVRMRLGDRNKPKPSGPDGITTNDVDHVIFDHISATWGIDGIHDLRRGGNFTLQWSIYAEALDQSLHEKGGHAMLSSYRDLTGGVSIHHNLLASSRERHPTLGGSPKTDPRAIADFRNNVVYNPSGATNLGNCRINVVANDYRPGPNATSRKPIAVKAENRGATKVFLAGNVFEGNPGDTADNFLAVDVDQWSKGNYLHLSVAEIRAEAEFDCGRARPRTQPAEEAYELVLRNAGASRRRDSADARLVRGVRDRTHRMINSQDEVGGWPPLETLPAPPDSDRDGMPDAWERARQLNPEDPADRNGDRDGDGYTNLEEYLNGLCPTPVGGGA*