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berkeley_reactor_200306_planktonic_scaffold_267469_52

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(62261..63229)

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 311.0
  • Bit_score: 503
  • Evalue 2.10e-139
Porphobilinogen deaminase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFH6_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 311.0
  • Bit_score: 503
  • Evalue 1.50e-139
porphobilinogen deaminase similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 311.0
  • Bit_score: 503
  • Evalue 4.20e-140

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 969
ATGACGTCCGAAGGCGAAGCGGGCCCCTCCCCGGGCACGATCCGGATCGGGACCCGAGGGAGTCAACTGGCCCGTTGGCAGGCGGAGTGGGTCGCCTCGAGGCTCCGGGAGCTCCACCCCGGCCTCGTCGTCGAGCTCGTCGAGATCAAGACCCAGGGGGACCGCGACCGGAACTCCCCCCTGGCGGCGATCGGCGGCCTCGGCCTCTTCACCAAGGAGATCCAGCGGGCCCTCGCCGACTCGACCGTCGAGGTCGCCGTCCACAGCCTCAAGGACCTCCCGACCCGAGGCCCCGAAGGGCTGACCCTGGGCGCCGTGCCGGCGCGTGAAGACGCGGCCGATGCCCTGATCGCCCCGGTTCACCGGACGCTCGAGGCGCTCCCGGAGGGGGCCTCCGTCGGCACGGGCTCGCTCAGGCGTCGGGCGGAACTGCTCCACGCCCGCCCCGACCTCCTGGTGGTCGGCATCCGGGGCAACGTCGAGACACGTTTGAACCAGGCCCTGGACGGGACCCTCGACGCGGTGGTCCTCGCCGAGGCCGGCCTGCGGCGGCTGGGGCTCGATCGGCACGCGACCGAGCGGCTGGGTCCGCCGAGGTTCCTGCCGGCGGTCGGGCAGGGGGCCCTCGGGATCGAGTGCCGGGCCGACGACGCGGCGACCCTCGCATTCCTGGCCCCGCTGGACGACCCGTCGACCCGCCGTGCGGTGCTCGCCGAGCGTCGGGCCCTCGCCGAGCTCGAGGGGGGGTGCATGATCCCGATGGCCGCCTGGGCCCGCGACGTCGACGACGGGTCAACCGGCCCCGGGCTCGCCCTTGACGCGGCCGTCTACGACCCGGACGGCCGCGAGCGTCTCTTCACCTCGCTCCGGGGCCCGCGCGACAACCCCGAGGAGCTCGGCCGTCGCGTCGCGCAAGACCTCCGCGATCAGGGGGCCGAACGCCTCCTCGGGCTCGTCCGGCGCCCCTGA
PROTEIN sequence
Length: 323
MTSEGEAGPSPGTIRIGTRGSQLARWQAEWVASRLRELHPGLVVELVEIKTQGDRDRNSPLAAIGGLGLFTKEIQRALADSTVEVAVHSLKDLPTRGPEGLTLGAVPAREDAADALIAPVHRTLEALPEGASVGTGSLRRRAELLHARPDLLVVGIRGNVETRLNQALDGTLDAVVLAEAGLRRLGLDRHATERLGPPRFLPAVGQGALGIECRADDAATLAFLAPLDDPSTRRAVLAERRALAELEGGCMIPMAAWARDVDDGSTGPGLALDAAVYDPDGRERLFTSLRGPRDNPEELGRRVAQDLRDQGAERLLGLVRRP*