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berkeley_reactor_200306_planktonic_scaffold_302643_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 34431..34958

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7A029 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 174.0
  • Bit_score: 256
  • Evalue 1.30e-65
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 175.0
  • Bit_score: 240
  • Evalue 2.10e-61
Regulatory protein TetR {ECO:0000313|EMBL:AEU36634.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 175.0
  • Bit_score: 240
  • Evalue 1.00e-60

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Taxonomy

Granulicella mallensis → Granulicella → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGCGGCAGCGACCCGCGTGATTGTGACGCGAGGGCTGAGCGCGCCGACGGCGGTGATCGCGCAGGAGGCCGGCGTTGCGAATGGGTCGCTGTTCACCTATTTCGAGACCAAGGCCGACCTTTTCAACCAGCTCTATCTCGAGTTGAAGGCCGGAATGGCCTCGGCCGCCCTCGAGGGGCTGCCTGCGAAGGCTGGGCTTCGCGAGCAGCTCTTCCACATCTGGTCGAAGTGGATGCGCTGGGCGGCGGCTCATCCCGAGAAGCGACGCGCACTCGCACAGCTCGCCGTCTCCGACGAGATCTCGCCGGAGAGCCGCGCCGAAGGACACAAGGCCATGGCCCCCATCGGCGCGTTGCTGGAACGAATCCGCGCCGACGGCCCCATGCACAAAGCTCCGATGGCCTTCGTCGTCGCGATCATGAACTCCGTTGCAGACGCCACGATGGATTTCATGATCCAGGATCCCTCGCACGCGGGCAAGCACTGCGAGGTCGGGTTCGATGCCCTCTGGCGCATGCTGGAATGA
PROTEIN sequence
Length: 176
MAAATRVIVTRGLSAPTAVIAQEAGVANGSLFTYFETKADLFNQLYLELKAGMASAALEGLPAKAGLREQLFHIWSKWMRWAAAHPEKRRALAQLAVSDEISPESRAEGHKAMAPIGALLERIRADGPMHKAPMAFVVAIMNSVADATMDFMIQDPSHAGKHCEVGFDALWRMLE*