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berkeley_reactor_200306_planktonic_scaffold_302643_24

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 35095..36039

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3CAEC similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 304.0
  • Bit_score: 452
  • Evalue 2.90e-124
Putative Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCE06158.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 305.0
  • Bit_score: 438
  • Evalue 8.00e-120
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 296.0
  • Bit_score: 397
  • Evalue 2.40e-108

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTCGAAGATGAGTTTCATGAGCCATTCCAAAGATCGCAAAGCGTACATCATCACCGGCCCGACTTCCGGAATTGGTCGCTGCGCGGCATTCGAGCTGGCCGAGCACGGCATGGTCGTCTTGGTGGGCCGCGACCGCGGCAAGCTGGACGATGTGCGGAAGGCCATCGCGCGGAAGGGCGGGCATGCGGTCTCGGTCGTGTGCGACCTGTCCGATCTCGCGAGCGTGCGCCGCGCCGCCGCGGAGATCGTCTCGCTCCATCTTCCGATTGTCGGGCTGCTCAACAACGCGGGCATCATGGCGATGCGCGCCTCGAAGAATGCCTTGGGCTGGGACATGACGTTCGCGACGAACCACCTCGGCCCGTTCGCGCTGACCGAGGCGCTCGTCCCCCATCTCCCCGACGGTGCGAACGTCGTCTTCGTCGCCTCCGCGGTGGAAGATCCCGAGCGCAAGCCCGCCAAGGCCTTCGGCTTCCGCGGTGCCCGCTATGTTTCCGCGGAGGCGAGCGCCCGCGGCGAGTGGGAGCCCGGCGGTTCCAAGCTGCCGGGCGCGGACGCTTACGCCACGTCGAAGCTGTGCACCCTCGCCACGGCGATGGCGTTCGCCCGTGAGACGCCACGACTCCACTTCAACGCGGTCGAGCCGGGCGTCACCCCGGCCACCGGCCTCGGGCGCGACGCCAACGCCCTCGTGCGTCTCCTTTCGAAAACCGTCATCCCGTTCCTTGTGCCGCTGCTCATGCCCTTCGTGACGTACTTGAGCACCCCGAAGCGAGCCGGGCGGGTGATCGCCAAGGTCCTCCTCAATCCCTCGGGCGAGACCGGCATCTACTACGATGAGGGCGGCCGGCCGATGCTCGGTTCCACGCTCGTGCGCGACCCGAAGTTCACAGATCGCGTCGTCGCCGAAACCCGCGCCCTCCTGACGGACGCTCTCATGTAG
PROTEIN sequence
Length: 315
MSKMSFMSHSKDRKAYIITGPTSGIGRCAAFELAEHGMVVLVGRDRGKLDDVRKAIARKGGHAVSVVCDLSDLASVRRAAAEIVSLHLPIVGLLNNAGIMAMRASKNALGWDMTFATNHLGPFALTEALVPHLPDGANVVFVASAVEDPERKPAKAFGFRGARYVSAEASARGEWEPGGSKLPGADAYATSKLCTLATAMAFARETPRLHFNAVEPGVTPATGLGRDANALVRLLSKTVIPFLVPLLMPFVTYLSTPKRAGRVIAKVLLNPSGETGIYYDEGGRPMLGSTLVRDPKFTDRVVAETRALLTDALM*