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berkeley_reactor_200306_planktonic_scaffold_327501_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 8810..9298

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC52_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 138.0
  • Bit_score: 192
  • Evalue 2.80e-46
RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 138.0
  • Bit_score: 192
  • Evalue 8.00e-47
RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 {ECO:0000313|EMBL:AGA26251.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 138.0
  • Bit_score: 192
  • Evalue 4.00e-46

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 489
ATGTGTCCCGACGCGGACGAGACCCAGGTACTCCTGAAGTGTGTCGAACAGGACGGCCCCGCGGCCTCGAGCCGGCTCTGGGAGAGGCATCGCGAACCCCTCAAGCGAATCATCCGACTCCGGCTCGACCCGATGCTGGGACGGAGGGTCGACGCCAGCGACGTCGTCCCGGAGGTCTTGCTCAAGGCCGATCAGCGCCTCGGCGACTATCTCCGGAAGCCGACGATCCCCTTCCCCCTCTGGCTCGGGCAGATCGCACGCGACCACGTGATCGACGAGCACCGTCGACATCGAGTCGCGGCGCGTCGGAGCCCGGATCGTGAGCAATCCCTGGTGGTCGCCGAGTTCGCGGACCAATCGTCGTTCCTGTTGATGGCCGAGCTCCGCGACCCGAACCCGACGCCCTGGGCCGCGAGCTCGAGCGGCCGTTCCGATGCGAGAGACGACTATTTACAAGCCCGAAGCGCAAGCGAGGGAATTTCTTCGTGA
PROTEIN sequence
Length: 163
MCPDADETQVLLKCVEQDGPAASSRLWERHREPLKRIIRLRLDPMLGRRVDASDVVPEVLLKADQRLGDYLRKPTIPFPLWLGQIARDHVIDEHRRHRVAARRSPDREQSLVVAEFADQSSFLLMAELRDPNPTPWAASSSGRSDARDDYLQARSASEGISS*