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berkeley_reactor_200306_planktonic_scaffold_339394_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(8952..9302)

Top 3 Functional Annotations

Value Algorithm Source
pectin degradation protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A44FC similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 115.0
  • Bit_score: 180
  • Evalue 6.10e-43
Possible pectin degradation protein {ECO:0000313|EMBL:EDL61247.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 116.0
  • Bit_score: 172
  • Evalue 2.30e-40
cupin similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 91.0
  • Bit_score: 102
  • Evalue 6.00e-20

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 351
ATGGGGTTCGTTGAGATTTCGGAGTACCCGCCGATCGAGCCCGTCCCCGGGTGTCGGATGAGGACGCCGTTCGGGGAGAACCTGATGCTGTCGTACCTCGAGATGGACGACGGGGCGGAGATCCCGACGCATTCGCACCCGCACGAACAGGGAGGGATGCTGGTCAAGGGGACGGTCGAGCTCACGATCGGCGACGAGACGCGTCGGGTCGAGGCCGGGGCGATGTTCTTGATCCCTTCGGGGGTGCCGGATCGGGTCGTCGCGATCGGCCCGGCGGTCATCCTCGACGCCTTCAGCCCGGTGAGGGAGGACTACGCGGAGCTCGCGAACCGCTATATCCCCACCCGCTGA
PROTEIN sequence
Length: 117
MGFVEISEYPPIEPVPGCRMRTPFGENLMLSYLEMDDGAEIPTHSHPHEQGGMLVKGTVELTIGDETRRVEAGAMFLIPSGVPDRVVAIGPAVILDAFSPVREDYAELANRYIPTR*