ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_339394_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(10279..11208)

Top 3 Functional Annotations

Value Algorithm Source
Putative sirtuin-type regulators for CoA ligase (Histone deacetylase superfamily) n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBA8_DESAA similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 313.0
  • Bit_score: 248
  • Evalue 4.80e-63
Uncharacterized protein {ECO:0000313|EMBL:KKL26199.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 290.0
  • Bit_score: 260
  • Evalue 2.30e-66
histone deacetylase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 313.0
  • Bit_score: 248
  • Evalue 1.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 930
GTGGTCCCGATCGTCTACCACTCGAGATACAACATCACGGCGTTTGGACTGGAACGTCGGCATCCGTTCGACGGCCAGAAGTATCGCCGGATCCACGACGCGTTGATCGCGCGGGGGCTGCGCCGGACGGGCGACTTCGATCGGCCTCGTCCCGTGAGGCGTTCCGAGCTCCTCGAGGTCCACACGCCCGAATACCTGCGCTCGCTCCGCCGCAGGCCGGTGCTCGGTCGGATCCTCGAGGTGCCGATCGTCGCGGCACTGCCCCGTTGGTTGATCGAGTGGCGGATCCTGGGGCCGATGCGGTACGCGACGGGGGGAACGGTCCTCGCGGCGCGCCTGGCGCTCGAGCGGGGGCTGGCGATCAACCTCGGGGGCGGCTACCACCACGCGGGCCCCGGCTGGGGGGGTGGGTTCTGCGTCTATTCCGACGCCGCCCTCGCCGCGGCGATCCTGCACGCGGAAGGGCGAGCGGCCCGCGTCCTCGTGGTGGACCTCGACGCCCACCAGGGCAACGGCACCGCGGCCGTCTTCGCGAGCCGGGACTGGGCGTCGATCTTCGACGTGTACGAGGACGACCTCTTCCCGAGCCGGAAGGAGCCCGAAGACTATCCCGCGCCGATCCCCGCGGGGTGGACCGGCGTCGAGTACCTCGACCTCGTCAGAGAGCTCTTGCCCGAAGCGCTCGACGCCGTCCGGCCGAACCTCGTGCTCTACAACGCCGGGTCGGACCCGTTCACGGACGACCCTTTGACCCGGCTTCGCCTCTCCGCCGACGACCTCGCCGAGCGCGACCTCCTCGTCGTCGACATGATCCGGAGCCGGGCGATCCCCGTGGCGATGGTCCTCTCCGGCGGGTATTCTGCGGACTCCTGGAAAATCCACGCCGATGCCATCGAGGGGATCCTCACCCGGTTCGACGCGGCGTCTTGA
PROTEIN sequence
Length: 310
VVPIVYHSRYNITAFGLERRHPFDGQKYRRIHDALIARGLRRTGDFDRPRPVRRSELLEVHTPEYLRSLRRRPVLGRILEVPIVAALPRWLIEWRILGPMRYATGGTVLAARLALERGLAINLGGGYHHAGPGWGGGFCVYSDAALAAAILHAEGRAARVLVVDLDAHQGNGTAAVFASRDWASIFDVYEDDLFPSRKEPEDYPAPIPAGWTGVEYLDLVRELLPEALDAVRPNLVLYNAGSDPFTDDPLTRLRLSADDLAERDLLVVDMIRSRAIPVAMVLSGGYSADSWKIHADAIEGILTRFDAAS*