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berkeley_reactor_200306_planktonic_scaffold_12886_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 3593..4738

Top 3 Functional Annotations

Value Algorithm Source
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 376.0
  • Bit_score: 622
  • Evalue 2.10e-175
queuine tRNA-ribosyltransferase (EC:2.4.2.29) similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 376.0
  • Bit_score: 427
  • Evalue 2.70e-117
Queuine tRNA-ribosyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDJ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 376.0
  • Bit_score: 622
  • Evalue 1.50e-175

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1146
ATGTTTGAACTGCTCAAAACTGACACGCATACCCAGGCGCGCCTTGGAAAACTGACCACGGCTCATGGCGTCGTGGACACACCGGTTTATATGCCGGTGGGCACGCAGGCGAGCGTCAAGGCGCTGGACCCGCGCGAGCTGGTGGAGATGGGCACGCAGATCATTCTCGGCAACACCTATCATCTCAACATCCGGCCCGGGTTGGAGATCATTGGTGCCGCCGGCGGATTGCATCGGTTCATGAACTGGGAGAAACCGATCCTGACCGACAGCGGCGGCTTTCAGGTTTTCAGCCTGGCAAAGATTCGCAAAGTCAAAGCGCACGGCGTGGAATTTCGCTCCCATCTGGATGGCTCCAAGCTGTTCATCGGGCCGAAGGAATCCATGGAAATCCAGCGCGTGCTTGGCTCGGACATCGCGATGGTGTTCGATGAATGTCCGCCGCACGACGCGCCCGCGCGCGAGCAACGCCACGCCGTGGAACGCACCATTCGCTGGGCGCGGGAATGCCGGGAACAACCGCGTGCGGAAGGTCAGAAAGTCTTTGGCATCGTCCAGGGCGGCAACAACGCCGCGCTGCGCGAGGAATGCGCCAAGGCAATCGTGCCACTGGATTTCGACGGTTACGCCATCGGCGGTGTGAGCGTCGGCGAACCGGAACCGGAGATGTTGCAGGCGATTGAATTTACCGTCCCGCATCTGCCGGCGAACAAGGCGCGCTACGCCATGGGCCTCGGCACGCCGGCGCAGATGCTGGAATTGATCGCGCGCGGCGTGGACATGTTTGACTGCGTATTGCCCACGCGCGTCGCCCGCAACGGCACGGCTTACACGCGCTTCGGTGCCATCGGCATCAAGGGCGGACAATTCAAAGCAGATTTCCGGCCAATTGAGGAAGGTTGCGATTGTTTCGCCTGCAAGCATTTCACCCGCGCCTATCTCCGCCATTTGCTGAATGTGAACGAGATTCTCGGCCTGCGCATGTTGAGCGTTCACAACTCGCACATGTATTTGAAGGTGATGGCCGATGCGCGGGCGCATCTGGCGTCAGGGACGTTTGCAGAGTTCTACCGGGAATTCATCGCCAACTTTAAACCGTCCGCGCGGGTGCTGGCCCAGCGCACGAAACTCGCCGCCGCCGATTGA
PROTEIN sequence
Length: 382
MFELLKTDTHTQARLGKLTTAHGVVDTPVYMPVGTQASVKALDPRELVEMGTQIILGNTYHLNIRPGLEIIGAAGGLHRFMNWEKPILTDSGGFQVFSLAKIRKVKAHGVEFRSHLDGSKLFIGPKESMEIQRVLGSDIAMVFDECPPHDAPAREQRHAVERTIRWARECREQPRAEGQKVFGIVQGGNNAALREECAKAIVPLDFDGYAIGGVSVGEPEPEMLQAIEFTVPHLPANKARYAMGLGTPAQMLELIARGVDMFDCVLPTRVARNGTAYTRFGAIGIKGGQFKADFRPIEEGCDCFACKHFTRAYLRHLLNVNEILGLRMLSVHNSHMYLKVMADARAHLASGTFAEFYREFIANFKPSARVLAQRTKLAAAD*