ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_24546_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(25071..26021)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent epimerase/dehydratase id=4396259 bin=GWF2_Lentisphaerae_52_8 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 306.0
  • Bit_score: 416
  • Evalue 1.80e-113
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 307.0
  • Bit_score: 400
  • Evalue 3.80e-109
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 308.0
  • Bit_score: 443
  • Evalue 1.90e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 951
ATGAAAATTCTGGTCACCGGCGGCGCCGGATTTATCGGCAGTCATATTGTGGAACATTTCCAGGGCCGGGCCGAGGTGCGGGTGCTGGACAACTTGCGCTCCGGCTTCAAGCACAACCTGGCCGGGCTGCGGCACGAATTCATCGAGGCCTCGATTTTGGAGCGCGACGCGGTGCGGCGCGCGGTGGCGGGCGTGGATTACATTTTTCACCTCGCCGCGATGATCAGCGTGCCGGAATCCATGACCAACCCGGTCGAATGCAACGCGATCAACGTCCAGGGCACGCTCGTGGTGCTGGAGGAAGCGGCGAAGGCCGGCGTGAAGAAGCTGGTCCTGAGCACGTCCGCCGCGATCTACGGCGACAATCCGGTGGTGCCGAAAGTGGAAACGATGTTTCCCGAGCCGAAAAGCCCCTACGCCATCACCAAGCTCGACGGGGAATACTATTGTCACATGTTCACGGCGGAAAAACGGCTGCCAACCGCGTGCCTGCGCTATTTCAATGTGTTCGGCCCGCGCCAGGATCCCCGCAGCCAATACGCGGCGGCGGTGCCGATTTTCATTGATCGCGCCGTGCGCAACGAGCCGATCACCATTTATGGCGACGGCGAACAGACGCGCGACTTCATCTATGTGAAGGACATCGCGGCGGCAAACTGCTTTTTTGCCACGCAATCGCCCGCCACCGGCGTGTTCAATGTCGCCTATGGCCGCAAGCTCTCGATCAAGGATCTGGCTCGGAACATTTGCGCCCTGACCGGGTCGCGATCGGAGATCCGGCATGCCGCCGAGCGGGCCGGCGACGTGAAACATTCCATGGCCGCGATCCATAAACTGCGGGCGGCCGGTTTCGAGCCGGCGAACGAATTCGCGACGGGGCTGGCGGCCACCATCAAATTTTTTCAACAGCAGACCGGGCCGAAAACGGCCGGCAGCCCGGCCAAGGTTTAA
PROTEIN sequence
Length: 317
MKILVTGGAGFIGSHIVEHFQGRAEVRVLDNLRSGFKHNLAGLRHEFIEASILERDAVRRAVAGVDYIFHLAAMISVPESMTNPVECNAINVQGTLVVLEEAAKAGVKKLVLSTSAAIYGDNPVVPKVETMFPEPKSPYAITKLDGEYYCHMFTAEKRLPTACLRYFNVFGPRQDPRSQYAAAVPIFIDRAVRNEPITIYGDGEQTRDFIYVKDIAAANCFFATQSPATGVFNVAYGRKLSIKDLARNICALTGSRSEIRHAAERAGDVKHSMAAIHKLRAAGFEPANEFATGLAATIKFFQQQTGPKTAGSPAKV*