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berkeley_reactor_200306_planktonic_scaffold_30796_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(968..1864)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 271.0
  • Bit_score: 84
  • Evalue 1.60e-13
CRISPR-associated endonuclease Cas1 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R977_AMMDK similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 271.0
  • Bit_score: 84
  • Evalue 1.20e-13
CRISPR-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 271.0
  • Bit_score: 84
  • Evalue 3.30e-14

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Taxonomy

Ammonifex degensii → Ammonifex → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 897
ATGATCAACCACTTGATTCTGCTGACCGAGGATCAAGACCTGCACGTCATCAACGGCAAGCTGGTTTCCGGCCATCAAAAAATTGCCATTGATACGCTGGGCAGCGTGCAGTGCTTTTCTGCGGCCTGCCGCTGGTCGCAGTCGGCGCTGGAATGCCTGGTCACGCAATGTCCGGTCGTGATGTCCCGTTGGGATAAGCAGCAAAAGAAGTGGAAGACGTTCAGCCTCGCGCCTCGCGCCCGTTACGTGAATCCCACCGCCCTGTGGAAGCTTTGCCGGCTTTCGCCCAAGCAGGCCACGCAACTCGCCAGCGGGCTGCTTTGGACCAAGGTTTGCAACCAACATGAAATGTTGCGGACGTTTGATCCCCGGTTGGCGGACAAACCGCAACTGCGGGAAAATTCGTTTAACCGGATATTGCGTCTTGAGGCCAGCTATGCGCGTTTTTTCTGGCCACGTTATTTTGCGGCCATGGCCATGGATTTGTTTGAGCGAGAAAAGCGCAAAGCCAGCCAGCCCATCAACGTGGCCTTGAACTATGGTTATGGTTTTCTGTATCACGCGCTGGAATGGCAGTGCCTAGCCAGTGGATTGGACCCCACCGTGGGCATCATCCACAAGCTGCGCCGCAGCCGGCCCAGCCTGGCTTGTGATCTAATCGAGCCGCTGCGCTGCACGGTGGAATTGACCGTGGCACGGCATCTGGATGATCTGGCCGAACCCAAGCGGTTGGCCGGCCATTTTGCGGAATTATTTGAAACCCCCTTCATTTATCGCTCGGGCAAATTCAAGCTGCGTTCCATCATCCGGCTGATGGTGGAGTCGTTTGCCCGCAGCCTGGACGGCAAACAAGCGTTTCATCCCTTTGTTCTCCATGCTCGTGATGCTTGCCTATGA
PROTEIN sequence
Length: 299
MINHLILLTEDQDLHVINGKLVSGHQKIAIDTLGSVQCFSAACRWSQSALECLVTQCPVVMSRWDKQQKKWKTFSLAPRARYVNPTALWKLCRLSPKQATQLASGLLWTKVCNQHEMLRTFDPRLADKPQLRENSFNRILRLEASYARFFWPRYFAAMAMDLFEREKRKASQPINVALNYGYGFLYHALEWQCLASGLDPTVGIIHKLRRSRPSLACDLIEPLRCTVELTVARHLDDLAEPKRLAGHFAELFETPFIYRSGKFKLRSIIRLMVESFARSLDGKQAFHPFVLHARDACL*