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berkeley_reactor_200306_planktonic_scaffold_30796_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(61981..63501)

Top 3 Functional Annotations

Value Algorithm Source
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH32_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 503.0
  • Bit_score: 743
  • Evalue 1.00e-211
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EEF60953.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 503.0
  • Bit_score: 743
  • Evalue 1.40e-211
sugar (Glycoside-Pentoside-Hexuronide) transporter similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 503.0
  • Bit_score: 532
  • Evalue 7.80e-149

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1521
ATGAGCGATCATTTCATTCAAAAACTTTCCTTCGGCGAAAAGGCCGGCTACAGCGCGGCCGATGCCGCGGCAAACTTCGTCTTCATGACGATGATTTTGTTCCAGACGAATTTTTACACGGATGTCTTCGGTATTTCGGCGGGCGCGGCGGCGACCATTCTCATCGTGGCGCGCTTGTGGGACGCGGTCGCGGACCCGGTCGTGGGCATTCTGGCCGACCGGACCAAATCGCGCTGGGGCAAGTTTCGTCCGTGGATCCTGTTCACCGCGCTGCCCTGGTGCGTGGTGATGGTTCTGGCCTACACAACGCCGAAAGGCTGGAGCATGGGCGCCATGATCGCCTATGCCGGCATCACGAACATCCTGCTGATGACGCTGTATTCCATGAACAACATGCCGTATTCGGCGCTCGGCGGTGTGATGACGGGCGACGTGAACGAGCGCGCGAAACTGAATTCGTTCCGGTTCATCGCCGTCAACGCGGCCCAGTTTATTGTGGGGGGATTCACCTTGCCGCTGGTCGCGAAATTTGCCGCCGGGCACGACCGCCAGCACGGCTGGCAAATGACGATGGCGTTATGGGCGGCGCTCTGCCTGGTGTTGTTTCTCATCACCTTCGCCACCACGCGCGAACGCATCCAGCCGCCGCCGCAACAAAAATCCAACCCCCGCGCGGACTTTGCCGCGCTGATCCGGAACCGTCCGTGGATCGTGATGTTTTTGATGACGCTGTTTCACTTCGCCATGCTCTCGTTTCGTGGCGGCGCGCTCTACAATTACTATCATCACTACGCCGACAAGGCGGCCATGTTCGACTTCGTGCAAAAACTCGGGCTCACCGCCCCCGCCGGCGCGCCGTCCTCCGGCCTTTGGGAAACCCTTGGCTACATTGTTCACGGCGGCAAAGCGGACCTGGCAAACAGCAACGTCGCCGATGTCTTCAACAGCATCATCAACATGCTGGGCACGGGGGTGACGATCATCGTCATCATTTTATCGCCGTCGCTTTCCAAGACGTTCGGCAAGAAGGCCGTGGCCGTGGCGGGGTTCGCGCTTTCGACCGTGTGCGCCGCGGCCTTCTATTTCCTCGCGCCAGCCAATGTCGGCGGCATGATCGGACTGACGATTTTAGGCGCCATCGCCTACGCGCCGACCATTCCGTTGATTTGGGCGATTTACGCGGACGTGGCGGATTATTCGGAATGGAAAACCGGCCGGCGCTTCACGGGCATCGTTTTTGCCACCATCGGTTTTGCGCTGAAATCCGGCCTCGCCCTCGGGTCATCGTCCTTCTTGTGGCTGATGGAGTATGGTTTTGGCTATGACACGAAACTTCCGGACGCGCCGCAAGCGGTGCATGGCTTCCGCGTCTGCTCCGGTTTCGGCGTGGCGGCGTTGTTTGCGGCCTGCACGGTGTTGCTGCTCGTTTACCAGCTCAACAAACGGACCACGATTCAAATGGCGGATGAACTGGCGGCGCGCCGGAACCAATTCGCCGGTGATCCCGCCCCGGCAAGCTGA
PROTEIN sequence
Length: 507
MSDHFIQKLSFGEKAGYSAADAAANFVFMTMILFQTNFYTDVFGISAGAAATILIVARLWDAVADPVVGILADRTKSRWGKFRPWILFTALPWCVVMVLAYTTPKGWSMGAMIAYAGITNILLMTLYSMNNMPYSALGGVMTGDVNERAKLNSFRFIAVNAAQFIVGGFTLPLVAKFAAGHDRQHGWQMTMALWAALCLVLFLITFATTRERIQPPPQQKSNPRADFAALIRNRPWIVMFLMTLFHFAMLSFRGGALYNYYHHYADKAAMFDFVQKLGLTAPAGAPSSGLWETLGYIVHGGKADLANSNVADVFNSIINMLGTGVTIIVIILSPSLSKTFGKKAVAVAGFALSTVCAAAFYFLAPANVGGMIGLTILGAIAYAPTIPLIWAIYADVADYSEWKTGRRFTGIVFATIGFALKSGLALGSSSFLWLMEYGFGYDTKLPDAPQAVHGFRVCSGFGVAALFAACTVLLLVYQLNKRTTIQMADELAARRNQFAGDPAPAS*