ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_30796_95

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(151742..153565)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DD694 similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 550.0
  • Bit_score: 438
  • Evalue 6.50e-120
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 578.0
  • Bit_score: 438
  • Evalue 1.60e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1824
GTGAATTATCCAAAGATCAAAGCAGCTTTCATTTGTCTGGTGGCGGGAGCCGCGTTCGGCGCGCCTTCCGAAGTTGCCGGGGCGACTAATGAAACGATTGATGTTCGCGCTGCGGGCTTTGCGGTCGGGCAGGGCAAGATCAATGCCGGCAACGACACCATTGACTTGAAGCTGGATGCCGCCGGCCTGGCGCAACCGTTTTGCCAGTCGGCGATCAAACAGGACACGGCGCCCGCCAGTCGCGGGCCGGATTCGAAAATTCCCTACTTCACCGTGCGCTTTGCGCTGCCAATCCCGCCGGAAAATGCCACCAACGAGGTTGCGGCATTAACCGGCATGGACCCGCTGGTGTTTACTCATAACCATTCGCCCGGGTTTGAAATTCTGCCCAATGGCGACGCGTTGGCGGTCTGGTTCAGCACGCCGCCCGGCAAGGCGGAAGCGGATCCGTCCACGTCCTTTGTGCAGGCGCGGCTGCGCTACGGCGCGGAGGAATGGGACATGCCGGAACTGTTTTTCAAGACGAAGGGCTTCAACGACCAGTCCGGGCTGTTGTGGAATGATCACGGTAAAATCTGGTTCTTTGGCGGTGGCCGCGGCTTGTCGGACTGGGTGCCGTTTAAAATGGCGGTTTCCACCGACAACGGCGCGACGTGGAAACTGTCGCTGCCGCAACTGGACCGGCCGGCGGAAAGTTTTACCGCGCAGCCCATCACCAGCGCGTTTCGCGGTCCGAACGGCGCCATCTATTTCGCGATGGACGGTCACGCCGCCCACAGTTTTCTCTGGCGCAGCGAGGATGACGGCGTGCATTGGCATGACATGGGCGGACGCACGGGCGGCCGGCATTCGGTGATCGTGCCGCTGGATGAGAAAGGCGATCTGCTTTCCATCGGAGGGAAAAATGCGGCGGTGGATGGCTGGTCGCCGGAGAATTATTCCACCAACTGGGGCGCAAGCTGGAGCGACAGCAAGGCGTCGCCGTTTCCGCCCCTGGGTTCCGCGCAACGGCCGTCGCTCATCAAGCTCGCGGACGGAAATTTGTTTTACGTGGGCGACGCCTACCTGCAAAAAATTCACCGCAATCCGCCGGCGGGCTGGAACCACGGCAACGAACCGTTCGTTGCCATTTCCACCAATCAGGGCGCGTCGTGGCGCATCAAGCCGCTGCCCGTGCAACTGCCCAATTTTCATTTTCTGACCAACGGCACGGTTGGTTATGTCACCGCGCGCCAGGCGCCGAACGGGGTGATTCACATTTTAACCACCGTCACGCAGCCGTGCCTGCATTATGAACTGAACGAAGCCTGGATTCTTTCGGATGTGGGCGACCTTCCGCCGGAAACCAGCGGCGGCGTAATCCAGCATTACGCGGAACATTACCCCAACGGCCAGGTGCGTGCGACCTGGAGCGCCCGGATTTGTCCGCACGGAAGATATTTGCTGGACGGCGTGGAAACCGATTATTACGCGAACGGCCAAAAGGAACATCTGGTGACGTATCAGGATGGATGCAAGACCGGTTCGGAGGTTTTTTGGGCCGCCGATGGAACCAAGCTTTCGAGTTGGCAACATGACTTGGCGCAGCATCGCAGCGTGTGGACTCATTATTGGCCGAACGGCCGGAAGCAGGTGGCATCCACCTGGAACACGCGGCCCACGGCGCGGGATTTGGACCGCGCCTTCTTCGGCCTGGTGGCGGATGGCCCGGTTTATCGGTGGCATGAGGATGGCAGCCCGGCCGGCGCTTATTATTTTACCAACGGCGTTTTGGACGGTTTGCGTTCCTCGCCGCTGGTTCGGCGCGTAAACGAAACTTTTTAA
PROTEIN sequence
Length: 608
VNYPKIKAAFICLVAGAAFGAPSEVAGATNETIDVRAAGFAVGQGKINAGNDTIDLKLDAAGLAQPFCQSAIKQDTAPASRGPDSKIPYFTVRFALPIPPENATNEVAALTGMDPLVFTHNHSPGFEILPNGDALAVWFSTPPGKAEADPSTSFVQARLRYGAEEWDMPELFFKTKGFNDQSGLLWNDHGKIWFFGGGRGLSDWVPFKMAVSTDNGATWKLSLPQLDRPAESFTAQPITSAFRGPNGAIYFAMDGHAAHSFLWRSEDDGVHWHDMGGRTGGRHSVIVPLDEKGDLLSIGGKNAAVDGWSPENYSTNWGASWSDSKASPFPPLGSAQRPSLIKLADGNLFYVGDAYLQKIHRNPPAGWNHGNEPFVAISTNQGASWRIKPLPVQLPNFHFLTNGTVGYVTARQAPNGVIHILTTVTQPCLHYELNEAWILSDVGDLPPETSGGVIQHYAEHYPNGQVRATWSARICPHGRYLLDGVETDYYANGQKEHLVTYQDGCKTGSEVFWAADGTKLSSWQHDLAQHRSVWTHYWPNGRKQVASTWNTRPTARDLDRAFFGLVADGPVYRWHEDGSPAGAYYFTNGVLDGLRSSPLVRRVNETF*