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berkeley_reactor_200306_planktonic_scaffold_30796_102

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(161487..161765)

Top 3 Functional Annotations

Value Algorithm Source
UPF0345 protein SPV1_13137 id=1894564 bin=GWE2_RBX1_39_32 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 91.0
  • Bit_score: 108
  • Evalue 3.00e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 92.0
  • Bit_score: 104
  • Evalue 1.20e-20
Tax=GWF2_RBX1_38_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 91.0
  • Bit_score: 108
  • Evalue 4.30e-21

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Taxonomy

GWF2_RBX1_38_17_curated → RBX1 → Bacteria

Sequences

DNA sequence
Length: 279
ATGAAACACAATTCTTATTTTGAAGGCAAAGTTCAAAGCCTGGCCATCACCACCGGCGACGGTCCGGCCACGATCGGTGTGATCGAACCCGGCAAATACAGCTTTGGCACGGACTGCGAAGAACACATGCAGATCGTGACTGGCACGCTCAAGGCCAAACTGCCCGGCGGCGACTGGCAAAGCTATGCCCGCGGCCAGTCTTTCGTGGTGCCGCCGAACGTGAAGTTTGAAGTCGAAGCCGCCGCCGACGTGGCCTACCTCTGTCACTACAAGCGTTAG
PROTEIN sequence
Length: 93
MKHNSYFEGKVQSLAITTGDGPATIGVIEPGKYSFGTDCEEHMQIVTGTLKAKLPGGDWQSYARGQSFVVPPNVKFEVEAAADVAYLCHYKR*