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berkeley_reactor_200306_planktonic_scaffold_23420_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(8685..11123)

Top 3 Functional Annotations

Value Algorithm Source
DEAD_2 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 817.0
  • Bit_score: 972
  • Evalue 1.70e-280
DEAD_2 domain protein {ECO:0000313|EMBL:EEF63133.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 817.0
  • Bit_score: 972
  • Evalue 2.30e-280
DNA helicase, Rad3 similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 800.0
  • Bit_score: 649
  • Evalue 1.20e-183

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2439
ATGAATTCCACCGGCGGGAAATGTGTCCATGCGGTTTCGGTGCGCGAACTGGTGGAGTTTGTCTGGCGACGGGGCGACCTCGGCGCGGAGCGGGAATTTGTGGGGCCCAAGCGCGCCCTGGCCGGCATCCGGGGCCACCAAAAAATTCAACGCAGCCGCCCGCCGGGTTATCAGACGGAAATCCCCGCCGAACACCTTGTGGACGCCGGTGATTTCATTTTGCAAATCCGCGGCCGCATTGACGGCGCACTGTCTTCCGCAGCCGAAATCTGGATCGAGGAAATCAAAACGGTGCGGGGAACCTGGAATCAGCAGGCGGATCCGCTGCATTGGGCGCAGGCCAAATGTTACGGTTTTATCTTTGCGCACGACCGCAACCTGCCGGAACTCGCCATTCAAATGACCTATCTGGAACTGGAAACCGGCAAGTTGACCGTATTTCGCCAGACGTTTTCCCGGACCGCGCTCGCCGAATTTTTCACCACGACCATCGCCGCCTATGCCGGCTGGATGCGGGAGGAATTTCGCTGGCGGCGGGAACGAAATGCGTCCATCAATGCGCTCGCATTTCCGTTTCCGAACTACCGTCCCGGGCAACGCGAAATGGCCGTCGCGGTTTACCGGACCTTGACGCGGGGCGGGCGACTTTTTCTCGCCGCGCCGACCGGCATTGGCAAAACCATCTCCGCCCTGTTCCCGGCCGTGAAGGCGCTGGGGGAAGCAAAGCTGGAACGAATTTTCTATCTGACGGCGCGGACCGTCGGCAGAACGATCGCCGAAAAAGCCTGCGCGGATTTGCGCCGCGCCGGATTGAAGCTCCGCGCCGTGACGCTCACCGCCAGGGACAAAGTGTGCGTTCGCGACGGCAAGCCCTGTGATTTGCTGACATGCCCGCTGGCCATCGGTTATTACGACCGGGTCAAACCCGCCATTCGCGAAGCGTTGGCGCGCGGTGAAATCCACCGCGCCGCGCTCGATGAAATTTCGCAGCGGCATCAAGTTTGTCCGTTTGAACTGTCGCTTGATGTGTCGGTGTGGTGTGACGCCGTGATTTGCGATTACAATTACGTCTTCGATCCGCAGGTGTATCTGCGGCGCCATTTTGGCGAGGGCGACGGTCAATCCGCGTTCCTGGTGGATGAAGCCCATAATCTGGCGGACCGCGCGCGGGAAATGTTTTCAGCGGAGCTGGAAAGCGGAGAAATCCGCGCTGTCCGACGGATGATTCGTCCGGCCGTGCCCCGCTGTGCCCGCGCCCTGACCGGTTTACTCTCGGAACTGCAACAACTCGCCGGCTCCAGCGGTTCCGGGGACGAAGCCGCCGAACCATCCGATGCGGCCGGGGAATTGAATCTCTTTCCGGCAAACGCGCCGGCGCCGCAGGCCGCATCCGGCCGGACCAAAATCCGCCGCGACCTGTCCCCTGCCCTGATCGAGCGCATCGAAGACGCCCTTGCCGCCGCCGAAGTCTGGCTGGCGAAAAATCTGCCCGCCGATTTTCGCGAAGCCTTGCTCGCCCTCTATTTTCGTCTCCATGCGTTTCTGCGCACCGCCGGGCTTTATGACGCGCGCTATGTGACGATGATTGATGCATGGCATGTGGCGAACCTGAAGGTGCGCTTATTTTGCGTGGATCCGTCCGTCCTGCTGCGTCAGGCTTTGGAGCGAGGCCGGGCGGGCATCTTTTTTTCCGCAACTCTGGCGCCGGTTGACTATTATCGCACCCTGCTGGGCGGCGAAAGCCACGACCCGTTTTTGGAGCTGGCCTCGCCCTTTCCCCCCGAACATCTCGCGGTGCTGGTTCAGGATCGGATTCAAACCCAGTTTAAAAACCGCGCGGAATCACTTGTTCCGGTGGCGACCGCGATCCAGACACTAATTCACGGCAGGCCGGGCAACTACCTCGTTTATTTTCCGTCGTATCAATATCTCAACGACGTGTTGCAGGAGTTCAAAAACCTTTCGCCGACAACACAAGTGCTTGTGCAACGGCCCGGGATGACCGAAGCCGAGCGGGATCAATTTCTGCACGCCTTCGGCACGGGGCATGAGAAAACGCTCGTGGGGTTCGCCGTGATGGGCGGCGTCTTCGGCGAAGGCGTTGACCTGGTCGGTGAACGATTGATCGGCGCGGCGATCGTCGGCGTCGGCCTGCCGCAGCTTTGCGCGGAACGGGATTTGATCCGCGATTACTTTCAGACGCAAAACCAGCCTGGCTTTGAATTCGCCTACACCTTCCCCGGCATGAACCGCGTGTTGCAGGCCATCGGTCGCGTCATCCGGTCTGAATCGGATCGCGGCGTGGTGCTGCTGATTGATTCACGATTCAATGAACCACGTTACCGTCGTCTTTTTCCGCCGTGGTGGAAATCCATCCGGGTGCGCAGCGACGCCGCCCTCGCCGGTGCTATTCGCGAATTCTGGGAACGCCCGGCCTGA
PROTEIN sequence
Length: 813
MNSTGGKCVHAVSVRELVEFVWRRGDLGAEREFVGPKRALAGIRGHQKIQRSRPPGYQTEIPAEHLVDAGDFILQIRGRIDGALSSAAEIWIEEIKTVRGTWNQQADPLHWAQAKCYGFIFAHDRNLPELAIQMTYLELETGKLTVFRQTFSRTALAEFFTTTIAAYAGWMREEFRWRRERNASINALAFPFPNYRPGQREMAVAVYRTLTRGGRLFLAAPTGIGKTISALFPAVKALGEAKLERIFYLTARTVGRTIAEKACADLRRAGLKLRAVTLTARDKVCVRDGKPCDLLTCPLAIGYYDRVKPAIREALARGEIHRAALDEISQRHQVCPFELSLDVSVWCDAVICDYNYVFDPQVYLRRHFGEGDGQSAFLVDEAHNLADRAREMFSAELESGEIRAVRRMIRPAVPRCARALTGLLSELQQLAGSSGSGDEAAEPSDAAGELNLFPANAPAPQAASGRTKIRRDLSPALIERIEDALAAAEVWLAKNLPADFREALLALYFRLHAFLRTAGLYDARYVTMIDAWHVANLKVRLFCVDPSVLLRQALERGRAGIFFSATLAPVDYYRTLLGGESHDPFLELASPFPPEHLAVLVQDRIQTQFKNRAESLVPVATAIQTLIHGRPGNYLVYFPSYQYLNDVLQEFKNLSPTTQVLVQRPGMTEAERDQFLHAFGTGHEKTLVGFAVMGGVFGEGVDLVGERLIGAAIVGVGLPQLCAERDLIRDYFQTQNQPGFEFAYTFPGMNRVLQAIGRVIRSESDRGVVLLIDSRFNEPRYRRLFPPWWKSIRVRSDAALAGAIREFWERPA*