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berkeley_reactor_200306_planktonic_scaffold_23420_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 16886..17938

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 347.0
  • Bit_score: 495
  • Evalue 4.70e-137
DNA-directed DNA polymerase (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 349.0
  • Bit_score: 283
  • Evalue 4.40e-74
DNA polymerase IV n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9L4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 347.0
  • Bit_score: 495
  • Evalue 3.40e-137

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1053
ATGGACGCGTTTTACGCGTCGGTCGAGCAGCGTGACCAGCCGGCTTTGCGGGGCCGGCCGGTGATTGTCGGCGCGCCGCCCACGCAGCGCGGGGTGGTGTGCGCGGCCAGTTACGAGGCCCGGAAATTCGGCGTGCGCTCGGCGCTGCCGAGCGCAACGGCAAGCCGGCTTTGTCCGAACGGCATTTTTGTCCGGCCGCGCATGGATCATTACCGTGAGGAATCCCGGCAGATCATGGCCATTGTCGCCGCGACCGGCGCGGTCATTGAGCCGATGTCCATTGATGAAGCTTATCTGGACCTGTCCGCCGGTTCGCAGGCGGAGGATGCCGACGCGTCGCTGCAAAAGGCGCTGCCGCTGGCGCGGGAATTGAAGCGGCGGATTTTTGCCGAGCGCCGACTGACCGCCACCATTGGCATTGCCGCAAACAAACTGCTGGCGAAGATCGCCAGCGACCATCAAAAGCCGGACGGACTCACGCTGATTACGAATCGCGAAAAAATCGCCTTCCTCCGCCCCCTGCCGGTGCGCACGCTTTACGGCGTCGGCAAAGTCACGGAACAGTCGCTGAACCGGGCGGGCATCGTCACGGTGGGAGATTTGCAGGATTATGCGGGCGACCTGCGCGCCCTGGCCGGTTCCTTCGGGCCGAGGCTGAAACAATTCGCCCTGGGCGAGGACGATCGTCCGCTGGAAATCGGCGACGAAATCAAAAGCATCAGCGGCGAGGAAACGTTTCTGAAGGATACGGCCGACCGGAACATTTTGCGGGCCTGTCTGAAGGAACAGGCGGCGGACATTTCGGCCCGGTTGAAACACAAGCGGCTGGGGGCAAACACCGTGCAGGTGAAGGTGCGTTACGGCGATTTCACCACGCTGACCCGGCAGATCTCCGTGGAGGAACCGGTCAGCGCGGCGGCGGACATTTATCGGCTGGGGTGTTTTTTGCTCGCGCGCGAAAAGCTGGTTTCGCGGCCGTTGCGGTTGCTCGGGCTGGGCGTGAGCCAGTTGCGGGAGCCAACGGCCCGGCAACTGGCGCTGTTTCCAACGTAA
PROTEIN sequence
Length: 351
MDAFYASVEQRDQPALRGRPVIVGAPPTQRGVVCAASYEARKFGVRSALPSATASRLCPNGIFVRPRMDHYREESRQIMAIVAATGAVIEPMSIDEAYLDLSAGSQAEDADASLQKALPLARELKRRIFAERRLTATIGIAANKLLAKIASDHQKPDGLTLITNREKIAFLRPLPVRTLYGVGKVTEQSLNRAGIVTVGDLQDYAGDLRALAGSFGPRLKQFALGEDDRPLEIGDEIKSISGEETFLKDTADRNILRACLKEQAADISARLKHKRLGANTVQVKVRYGDFTTLTRQISVEEPVSAAADIYRLGCFLLAREKLVSRPLRLLGLGVSQLREPTARQLALFPT*