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berkeley_reactor_200306_planktonic_scaffold_23420_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(23761..24681)

Top 3 Functional Annotations

Value Algorithm Source
ParB-like partition protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGP1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 312.0
  • Bit_score: 395
  • Evalue 3.20e-107
ParB-like partition protein {ECO:0000313|EMBL:EEF61092.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 312.0
  • Bit_score: 395
  • Evalue 4.50e-107
Spo0J4; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 306.0
  • Bit_score: 257
  • Evalue 3.80e-66

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 921
ATGTCGAAACCCGCATTGGGACGCGGCCTGGGAGCACTCCTGGCCGGCAGTCCGGCAACCACATCACCGGCGCCGGCGCCGGTGGCGGCGGCCGTCGCGCCGCCGCCGGATGCGCGCGAACGTGTGCAGCGCGTGCCGCTGGGCCGGGTGCGTCCTTCCAGCCTGCAACCGCGCAAGCATTTTTCCGACGATGCGCTGCGTGAACTCGCCGATTCCATCCGCGAACAAGGCATCGTGCAGCCGCTCATTGTGCGCGAGCGGGACGGCCATTTTGAACTGATCGCCGGCGAACGCCGCTGGCGCGCCTCGCAGTTGTTGAACCTGCCGGAAGTGCCGGTCATTGTGCGCGAGGCCGATGATCGCGCGGTGTTGGAACTGGCGCTGATCGAAAATCTCCAGCGCGAAAATCTCAACGCCATCGAAGAGGCGCTGGGTTACGCCCAACTGGCGGAGCAATTCAATCTGACGCAGGAGGAAATCGCGTTGAAAGTCGGCAAAAGCCGCGCCGCCGTCGCCAACGCCACGCGCCTGCTGAAACTGCCATTGTCCGTCCAGGGGTTCATCCGTGAAGGCCGGTTGTCCGTCGGCCATGCCAAGGTGATTTTGGGGCTGGCGGCGGAACCTGACCAGGCCCATGCCGCCGAGCGCGTCATCAAGGAAGGCTTGAACGTGCGGCAGACCGAGGGCTTGATCGCCAAGCTGCAATCGCGCACCGCCCGGACGCCCGGGCCTGCCGCCGGCGTGCCCGCCGCGGTTCCGGTGGATGCCAACATTGCGCGCCTGGAGGAAAAAATGCGCGAAAAATTCGGCACCAAGGTCCGCTTGAAATACGCCGAGGGCAAGGGCGCGGTGGAAATTTCCTTCTTCAGCGACGACGAATTGCAGCGCGTTTTGGAAATCCTCCATGTCAACGCCGATTAA
PROTEIN sequence
Length: 307
MSKPALGRGLGALLAGSPATTSPAPAPVAAAVAPPPDARERVQRVPLGRVRPSSLQPRKHFSDDALRELADSIREQGIVQPLIVRERDGHFELIAGERRWRASQLLNLPEVPVIVREADDRAVLELALIENLQRENLNAIEEALGYAQLAEQFNLTQEEIALKVGKSRAAVANATRLLKLPLSVQGFIREGRLSVGHAKVILGLAAEPDQAHAAERVIKEGLNVRQTEGLIAKLQSRTARTPGPAAGVPAAVPVDANIARLEEKMREKFGTKVRLKYAEGKGAVEISFFSDDELQRVLEILHVNAD*