ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_29

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(32675..33523)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEB0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 282.0
  • Bit_score: 270
  • Evalue 1.10e-69
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 282.0
  • Bit_score: 285
  • Evalue 1.60e-74
Uncharacterized protein {ECO:0000313|EMBL:AKC81626.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 282.0
  • Bit_score: 285
  • Evalue 7.80e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucomicrobia bacterium IMCC26134 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 849
ATGAAGCCGGAACATTCCTTAAGCCAGCTTTGCGCTGCGTTTGCCGTCAAACGCAGCGGCTATCACGCCTGGGTCAAAGCCGGGGCCAGTCAGCGGGAACGCACCGACCATGTGTTGCGGAAGAAAATCCACACCGTGCATGCGCGGCATCGGGGGCGGTATGGGGCTCCCCGCATCCAGCAGGAACTGGCCGCCCAGGGCGACCGACACAGCTGCAAACGTATTGCCCGGCTGATGCGCAGCGAAGGTCTTCAAGGGTTGTGCGCCCGCCGGTTTGTGCCCCGCACCACGCAAAGCGATCACGACCAGCCCATCGCTCCGAATCGGCTGGCCCAAGTGCCAGTGCCCACGGGGCCGAACCAGACGTGGGTCACGGATTTGACCTATGTCTGGACGGCGGAAGGCTGGTTGTATGTGGCGGTGCTGCTGGACTTGTGGAGCCGGCGAGTGGTGGGTTGGGCCACTGCCGAAACGCTGCACACCCGGCTGACAACCCAAGCCTTGCAGATGGCCGTGCGCCATCGTCAACCCGCCCGTGGCGTGCTGCATCACAGTGATCGTGGCGTGCAATATGCCAGCGGCGAATATCGCGGCTGGCTGGCGGCAGCGGGCCTGGAGCCCAGTATGAGCCGGGCAGGCAATCCTTACGACAACGCGGCGATGGAAAGCTTCAACGCCACCTACAAACGGGAATGCGTGGGACTGGCCCAAGCCGGTGGCGGCTACGCCACCCGCGCGGAAGCGGCCGATGATTTTTTCAACTATGTTGAAAAATATTACAACCGGGTGCGGCGCCACAGCGCACTGGGTTATCAATCTCCTGTGGACTTTGAACTCCAACTAAACTAA
PROTEIN sequence
Length: 283
MKPEHSLSQLCAAFAVKRSGYHAWVKAGASQRERTDHVLRKKIHTVHARHRGRYGAPRIQQELAAQGDRHSCKRIARLMRSEGLQGLCARRFVPRTTQSDHDQPIAPNRLAQVPVPTGPNQTWVTDLTYVWTAEGWLYVAVLLDLWSRRVVGWATAETLHTRLTTQALQMAVRHRQPARGVLHHSDRGVQYASGEYRGWLAAAGLEPSMSRAGNPYDNAAMESFNATYKRECVGLAQAGGGYATRAEAADDFFNYVEKYYNRVRRHSALGYQSPVDFELQLN*