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berkeley_reactor_200306_planktonic_scaffold_37596_9

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(7975..11625)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 1224.0
  • Bit_score: 1177
  • Evalue 0.0
Recombination helicase AddA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFA1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 1224.0
  • Bit_score: 1177
  • Evalue 0.0
recombination helicase AddA similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 1284.0
  • Bit_score: 612
  • Evalue 2.40e-172

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3651
ATGGAAATTCAGCCGGACCAGCACCGGAACAATTCCCTGACGTCCGCGCAACAGCGGGCGGTCGTCGCGCGCGGCAATGTCCTGGTGATGGCGGGGGCGGGCACGGGCAAAACCAAAACGCTCGTCGAGCGCTGTTTGCATTGCCTGGAACAGGAACGCGTCGGGGTGGATGAGCTGCTCGTCGTCACGTTCACCGAGGCGGCGGCGGCCGAAATGCGACAGCGCCTGCGCAAGCAACTGGAGCTAAAAGCCGGCGCGAATCCCGCCGACGAACACTGGCCGAAGCAACTGGCGTTGTTCGATGTGGCCCACATCGGCACGCTGCACAGCTTCTGCCTGCGCCTGGTGCGGGAACATTTTTACGAGCTGGGCCTCGACCCGCAATTTGCCGTGCTTGCGGAAGGCGAAGCGCGGCAGCGCGCGGAGGAGACGCTCGACGAAATTTTCCAGTCGCATTACGCGGGCGCGGATGAGTTTTCGCTGGCCGTGCAGAACCTGATTCAAGTTCATGGCGGCGGGCGCGATGAAAATATCCGCAGGCTGGTTTTGCGGCTGCACCATTATTCCCAGGCCCGGCCCGATGCCGCCGGCTGGCTGGCGGGACAGGTTGAAAATTTTTCCGCGAACACGCCCGCCGGCTGGCAGCGCTGGTTGACCGGGGCAATCGCCGGCTGGCGTGATGAATGGCTGGCGGTTTTGGAAACTTTGAGGCGGGAAAATGTCAAGGCCGACGAACTGGCCACTTGTTTGTCCCGCCTGCCGGAGGATTTCACGCGGCCGGCGGCCGCCGAAGTGCTTGCAGAAATTGCCGCGGCGGATCTCACGGCCAGCTATCCCAAGGGGAAGGCCGGAAAATTGCGCCCGGCGCTCGGCGGCATTTTTGACGAGGCAAAATTTCTTGGTTCGCTGGCCGTTATGAAAAACGGGCGTGATCCGCTGACTGATGACTGGAACTGGGTGCGCGGCCAGATGACGGCCTTGTTGCGCCTGGCGCAGGAATTTGGCGGGGCTTTTGCCCGGCAAAAAATCGCGGACGGTGTCGTTGATTTTCATGACCTGGAGCAGCTTGCCCTGAAATTACTGTGGGATTTCGACACGCAAACGCCGGCGGCGGCGGCCGAAGTCTGGCGCCAAAAACTGCAATTCGTTTTTGTGGATGAATACCAGGACATCAACGCCGCGCAGGACAAGATCATCCAGGCGTTGAGCCGGGAACCGGCGGGGGCGGACGGGACCGCGCCGGCCCAAGGCAACCGTTTTCTGGTCGGCGACGTGAAGCAGAGCATCTACCGGTTTCGCCTGGCCGACCCGAAAATTTTCCGCGATTACGCGCACGCCTGGCGCCCACCGGCGGGCGAGACCATTCCGCTTTCCGAGAATTTTCGCAGTCGCGAGGGCGTGTTGAACTTCGTGAACTCCGTGTGCCGGCTGGTCCTGCGCGCGGAAGTGGGCGGCGTGGGATACGAACCGGACGCGGAATTGAAATTCGGTTCGCCGGCAACCCGCGGTGCGTTCCGCGCGGCGAATGATCCGTCACCGCGCGTGGAGCTGCTGCTGCGGCGCAAGGCAGGGCGCGACGAAACGTTGGAGGATGCCGACGACGAACTGGCCGGGCTGGACGAGGCGCAAAAGGAAGCGCGGCTGGTCGCCATGCGGCTGAAGCAACTGGTCGGGCAACGGCACGAGATCTGGGATGAACACTCCGGCGCTTTTCGGGCCGCCGAATGGCGCGACCTGACGATTCTGCTGCGTTCGCCGCGCGGCAAATCCGAGGTTTATGTGAAGGAATTCGAGCGTGCCGGCATTCCGCTGGCCGTGGCGCGCGGCGGGTTTTATCAAAGCGCGGAAATTCTCGATCTGTTGAGCCTGCTGCGGTTGCTGGACAATCCGCTGCAGGATGTGCCGTGCATCGCGGTGCTGCGTTCGCCGCTGGTGGGACTTTCGCTGGATGAACTCGCCGAAATCCGGCTGGCGGCCGGCGGACATTTTTGGACGGCCCTGAACCGGTGGCAATCCCTCACGGACGAGGCCAGTCTTCAGCCAGGCTCCCTTGCCGGAAAAATCTCCCAATTTCTCACCCGCTTCTCCCGCTGGCGCAAACAGGCGAGGCAGCATTCGCTTTCGCAATGTCTGGAGACGATTTTGGACGAGACCCTTTATGCCGACTGGTTGCGGGCGCAGCCGCGGGGCGCGCAGAGGGCGGCGAACGTGGCGGCCCTGCTTCATCTGACGCAGCAGTTTGATCAATTTCAACGGCAGGGTTTGCTGCGGTTCCTCAAATTCATCGAAGCGCAGCAGGCAACCGAAACGGAGCCGGAAGTCCCGGCCACGCCGGCGGAAAATGCCGTTCAATTGATGAGCATTCACCAGAGCAAGGGCCTGGAATTTCCGGTGGTGGTGCTGGCGGACCTGGCCAGGAGTTTTAACGAACAGGATTTGCGCGGCGAAATCATTTTTGACGAGGAGCTGGGACTGTGCCCGAAAGTGAAACCGCCGGTGAGCGGACGACGTTATCCGAGCCTGCCGCACTGGCTGGCGCAGCGCCGGCAAAAGCGCGAGCTGCGCGGCGAGGAATTGCGGCTGCTTTATGTGGCCCTCACCCGCGCCCGCGAAAACCTGATTCTGACGGCGACCGTTTCCGGCCAGAAATGGGCGGCCGTTTGGACGCAGGCGGAACCGGTGACCACGCGGAAAATCGCGGAGGCGCGAAGTTTTGCCGACTGGCTGGCGCTGTGGTTCGCGCACAACATCAACGCCGCGGATTCAACCGCCGGTGAAACCGCCCTGGTGAAATGGCGGCTGGTGGAGGATGCGGCATTGGCCGGAGACGTGAGTGAAACTTCAGGCGGGACACCACGCGATGACGCGCCGCCCGGCCCGCCGGAACCTTCGCCCCACCGGATTGAATCCCTCGACGAATCGGTCATGGCCGGACTCAAGGCGCGGCTTTCCTGGCAGTATCCATTCGGGGCGGCGACGGAGCGCAGGGCCAAGTCTTCGGTCACGGCCCTGCGGCGTGAAGCGGAGGAGCTGGATGACGAGGCGGAACAGGTGTTCAAACCGGAGGCCGCCGTCACCCGGCGGCTTGCGCGGCCACCCGCCCCGCCAAAGACGCGATTAACCGCGGCGCAAGTCGGCGCGGCGCACCACAAGTTTCTCCAGCAGGTGGCGTTGGATAAAACCGGGGCATTGGAAGCCGAGTTGGAACGATTGGTGCGGGAGAATTATCTGTCGGCGGAGGAAAGCCGCGCGCTGGATCTCTCCGCGCTGACGAAGTTCTGGAATGCGGAACTGGGCCGGAAAATTTGCGCCCATGCCGCGAATGTCCGCCGCGAGCTGCCTTTCACCGCCCGCTTCAGCCCCGAGGAAATCGCCGGTGTTACGGCCATCCCGCCGGCCGCCGGATTGGAAAACGAATTCATCGTGGTGCAGGGCGTGGCGGATTTGGTGGTGTTGCAGCCGGGGGAAATCTGGCTGGTGGATTTTAAAACCGACGAGGTGGGCGCGCGGGAATTGCCCGACAAAGTCAAAATCTACGCGCCCCAGTTAAAACTCTACGCGCAGGCGCTGGAAAAAATATTCGCCCGGCCGGTGACGTTGCGGGCGCTGCATTTTCTCGCGTTGGGAAAAACGGAAGCGTTGCCGGATTAA
PROTEIN sequence
Length: 1217
MEIQPDQHRNNSLTSAQQRAVVARGNVLVMAGAGTGKTKTLVERCLHCLEQERVGVDELLVVTFTEAAAAEMRQRLRKQLELKAGANPADEHWPKQLALFDVAHIGTLHSFCLRLVREHFYELGLDPQFAVLAEGEARQRAEETLDEIFQSHYAGADEFSLAVQNLIQVHGGGRDENIRRLVLRLHHYSQARPDAAGWLAGQVENFSANTPAGWQRWLTGAIAGWRDEWLAVLETLRRENVKADELATCLSRLPEDFTRPAAAEVLAEIAAADLTASYPKGKAGKLRPALGGIFDEAKFLGSLAVMKNGRDPLTDDWNWVRGQMTALLRLAQEFGGAFARQKIADGVVDFHDLEQLALKLLWDFDTQTPAAAAEVWRQKLQFVFVDEYQDINAAQDKIIQALSREPAGADGTAPAQGNRFLVGDVKQSIYRFRLADPKIFRDYAHAWRPPAGETIPLSENFRSREGVLNFVNSVCRLVLRAEVGGVGYEPDAELKFGSPATRGAFRAANDPSPRVELLLRRKAGRDETLEDADDELAGLDEAQKEARLVAMRLKQLVGQRHEIWDEHSGAFRAAEWRDLTILLRSPRGKSEVYVKEFERAGIPLAVARGGFYQSAEILDLLSLLRLLDNPLQDVPCIAVLRSPLVGLSLDELAEIRLAAGGHFWTALNRWQSLTDEASLQPGSLAGKISQFLTRFSRWRKQARQHSLSQCLETILDETLYADWLRAQPRGAQRAANVAALLHLTQQFDQFQRQGLLRFLKFIEAQQATETEPEVPATPAENAVQLMSIHQSKGLEFPVVVLADLARSFNEQDLRGEIIFDEELGLCPKVKPPVSGRRYPSLPHWLAQRRQKRELRGEELRLLYVALTRARENLILTATVSGQKWAAVWTQAEPVTTRKIAEARSFADWLALWFAHNINAADSTAGETALVKWRLVEDAALAGDVSETSGGTPRDDAPPGPPEPSPHRIESLDESVMAGLKARLSWQYPFGAATERRAKSSVTALRREAEELDDEAEQVFKPEAAVTRRLARPPAPPKTRLTAAQVGAAHHKFLQQVALDKTGALEAELERLVRENYLSAEESRALDLSALTKFWNAELGRKICAHAANVRRELPFTARFSPEEIAGVTAIPPAAGLENEFIVVQGVADLVVLQPGEIWLVDFKTDEVGARELPDKVKIYAPQLKLYAQALEKIFARPVTLRALHFLALGKTEALPD*