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berkeley_reactor_200306_planktonic_scaffold_37596_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 19951..21399

Top 3 Functional Annotations

Value Algorithm Source
Arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89) similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 341.0
  • Bit_score: 292
  • Evalue 1.30e-76
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192, ECO:0000313|EMBL:CCW36487.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 341.0
  • Bit_score: 292
  • Evalue 6.40e-76
Arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0F046_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 341.0
  • Bit_score: 292
  • Evalue 4.60e-76

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Taxonomy

Chthonomonas calidirosea → Chthonomonas → Chthonomonadales → Chthonomonadetes → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1449
ATGAATGACGTAGCGGTTATGAATGAACATTTTCCACCCACCCCGGCCTGCGCCCTGGGAAAACGGGAAAATCGTTCCCCGCTGACCGCCCATTCCCAGCAGAAATTTACCCGAAAACCGTTCGCGTTTTTCCGGCACAGCCAACGACTTGGGGCGATCCTGACCGGCGGCTGGCTCGCGGTTGCGACGGTCGCATCCGCGGCCCCGACCAATTTCCTCGCAGGAGCCGACCTGTCGCTGCTGCCGTTCTTCGAGGACCACGGCATCACGTATTCCGCCGACGGCCGGGCGCAGGATGCGCTCGCGATTTTGAAAAATCGCGGCATCAACTGCATCCGGCTCCGGCTGTTCACCAGCAGCGCCGCCCAAGCGCAGGTGGATCCCTACAACTACGTGAACAATCTGGATTACACCGTGCCGCTCGCGGTGCGCGTGAAAAATGCCGGACTGAAGTTCCTGCTGGATTTTCATTATTCCGACACGTGGGCTGATCCGGCGCATCAAGCCATGCCCGCCGCCTGGACCAATTTGGATTTCCCCCAGCTTGCGCAGCAGTTGCGCGATTACAACCGCAACTGCATCGCGGCCTTTAAAACGGCAAACGCCATGCCGGACTACGTGCAGGTCGGCAACGAAATCACCGCTGGCATCTTGTGGCCAACCGGTGCGGTGCCCGGCACCAACGCCGCCGTGCAATGGTCACGGTTGGGCCAGTTACTCGCGGCAGCCATTCAAGGCATCCAGGACGCCGCCGGAACCAACGTGCCGAAAATCGTCGTTCACATTGACCGCGGCGGCGACTGGAGCAGCACGAAATGGTTTTTCGACAACTTGATCCAGACACAACACGTATCGTTCGACATCATCGGCGAGAGCTATTATCCGTTCTGGCACGGCTCATTGGACGAGCTTGCCAATTGCCTGACCAACGCCGCCCTGCGTTATGGCAAGCCGGTGATGGTGGCCGAAACCGCGTTTCCGTGGACCAACTCGTATTGGGCGACGAACCTCTATGGCATCCCCGGCACCACCAACGGCCAGGTGCAATATGCCGCCGCACTTGCCCAAGCCGTGAAGAGCGTGCCGAACGGACTGGGCGCGGGGATTTTCTGGTGGGGAGCCGAGTATCAGAAATTGAACGGCGTGAATGAAGCCGGGTTCAATACAACCTCATTTTTCGATGCCAAAGGCAACGTGTTGCCGGCAGTTGACGCATTTGGGCAGATGGTCGCGCCGCTGATTTTGAGCGCGAAGCTGAATGGCGCGTTGTTGCAGTTGCAATGGCCGTTGAGCGGGGCCGGCATGACGCTCACCACCGCCACCAGTTTGTCACCCACAGCGGTCTGGACGCCAGTGACCAATTCTATTGAAAGCACGAATGCCAGCTTTCGAACGACGTTGCCACTGAATCACAACGCCAGCCGCTTTTTCCGACTTCAAACTCACTGA
PROTEIN sequence
Length: 483
MNDVAVMNEHFPPTPACALGKRENRSPLTAHSQQKFTRKPFAFFRHSQRLGAILTGGWLAVATVASAAPTNFLAGADLSLLPFFEDHGITYSADGRAQDALAILKNRGINCIRLRLFTSSAAQAQVDPYNYVNNLDYTVPLAVRVKNAGLKFLLDFHYSDTWADPAHQAMPAAWTNLDFPQLAQQLRDYNRNCIAAFKTANAMPDYVQVGNEITAGILWPTGAVPGTNAAVQWSRLGQLLAAAIQGIQDAAGTNVPKIVVHIDRGGDWSSTKWFFDNLIQTQHVSFDIIGESYYPFWHGSLDELANCLTNAALRYGKPVMVAETAFPWTNSYWATNLYGIPGTTNGQVQYAAALAQAVKSVPNGLGAGIFWWGAEYQKLNGVNEAGFNTTSFFDAKGNVLPAVDAFGQMVAPLILSAKLNGALLQLQWPLSGAGMTLTTATSLSPTAVWTPVTNSIESTNASFRTTLPLNHNASRFFRLQTH*